Gon4l regulates notochord boundary formation and cell polarity underlying axis extension by repressing adhesion genes

Stat3/Cdc25a-dependent cell proliferation promotes embryonic axis extension during zebrafish gastrulation

(2017) Yinzi Liu et al.   PLoS Genetics

The Chromatin Remodeling Protein Bptf Promotes Posterior Neuroectodermal Fate by Enhancing Smad2-Activated wnt8a Expression

(2015) Y. Ma et al.   JOURNAL OF NEUROSCIENCE

Local Increases in Mechanical Tension Shape Compartment Boundaries by Biasing Cell Intercalations

(2014) Daiki Umetsu et al.   CURRENT BIOLOGY

Distinct Apical and Basolateral Mechanisms Drive Planar Cell Polarity-Dependent Convergent Extension of the Mouse Neural Plate

(2014) Margot Williams et al.   DEVELOPMENTAL CELL

PCP and Septins Compartmentalize Cortical Actomyosin to Direct Collective Cell Movement

(2014) A. Shindo et al.   SCIENCE

A Molecular Base for Cell Sorting at Embryonic Boundaries: Contact Inhibition of Cadherin Adhesion by Ephrin/Eph-Dependent Contractility

(2013) François Fagotto et al.   DEVELOPMENTAL CELL

EpCAM Controls Actomyosin Contractility and Cell Adhesion by Direct Inhibition of PKC

(2013) Nadim Maghzal et al.   DEVELOPMENTAL CELL

Large-scale gene function analysis with the PANTHER classification system

(2013) Huaiyu Mi et al.   Nature Protocols

Chromatin modifiers and remodellers: regulators of cellular differentiation

(2013) Taiping Chen et al.   NATURE REVIEWS GENETICS

The Subread aligner: fast, accurate and scalable read mapping by seed-and-vote

(2013) Yang Liao et al.   NUCLEIC ACIDS RESEARCH

A Systematic Survey of Expression and Function of Zebrafish frizzled Genes

(2013) Masataka Nikaido et al.   PLoS One

STAR: ultrafast universal RNA-seq aligner

(2012) Alexander Dobin et al.   BIOINFORMATICS

Integrative Genomics Viewer (IGV): high-performance genomics data visualization and exploration

(2012) H. Thorvaldsdottir et al.   BRIEFINGS IN BIOINFORMATICS

Ddx18 is essential for cell-cycle progression in zebrafish hematopoietic cells and is mutated in human AML

(2011) E. M. Payne et al.   BLOOD

The Developmental Regulator Protein Gon4l Associates with Protein YY1, Co-repressor Sin3a, and Histone Deacetylase 1 and Mediates Transcriptional Repression

(2011) Ping Lu et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

BigWig and BigBed: enabling browsing of large distributed datasets

(2010) W. J. Kent et al.   BIOINFORMATICS

The tumor-associated EpCAM regulates morphogenetic movements through intracellular signaling

(2010) Nadim Maghzal et al.   JOURNAL OF CELL BIOLOGY

Muscle wasted: a novel component of the Drosophila histone locus body required for muscle integrity

(2010) S. Bulchand et al.   JOURNAL OF CELL SCIENCE

TheJustymutation identifiesGon4-likeas a gene that is essential for B lymphopoiesis

(2010) Ping Lu et al.   JOURNAL OF EXPERIMENTAL MEDICINE

Genetic Analysis of Fin Development in Zebrafish Identifies Furin and Hemicentin1 as Potential Novel Fraser Syndrome Disease Genes

(2010) Thomas J. Carney et al.   PLoS Genetics

The Sequence Alignment/Map format and SAMtools

(2009) H. Li et al.   BIOINFORMATICS

Fast and accurate short read alignment with Burrows-Wheeler transform

(2009) H. Li et al.   BIOINFORMATICS

Udu Deficiency Activates DNA Damage Checkpoint

(2009) Chiaw-Hwee Lim et al.   MOLECULAR BIOLOGY OF THE CELL

An actomyosin-based barrier inhibits cell mixing at compartmental boundaries in Drosophila embryos

(2009) Bruno Monier et al.   NATURE CELL BIOLOGY

Enzymatic assembly of DNA molecules up to several hundred kilobases

(2009) Daniel G Gibson et al.   NATURE METHODS

Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources

(2009) Da Wei Huang et al.   Nature Protocols

Arabidopsis DUO POLLEN3 Is a Key Regulator of Male Germline Development and Embryogenesis

(2009) L. Brownfield et al.   PLANT CELL

The Epithelial Cell Adhesion Molecule EpCAM Is Required for Epithelial Morphogenesis and Integrity during Zebrafish Epiboly and Skin Development

(2009) Krasimir Slanchev et al.   PLoS Genetics

Cooperation of polarized cell intercalations drives convergence and extension of presomitic mesoderm during zebrafish gastrulation

(2008) Chunyue Yin et al.   JOURNAL OF CELL BIOLOGY

Nature and anisotropy of cortical forces orienting Drosophila tissue morphogenesis

(2008) Matteo Rauzi et al.   NATURE CELL BIOLOGY

High-resolution in situ hybridization to whole-mount zebrafish embryos

(2007) Christine Thisse et al.   Nature Protocols