Whole-genome sequencing of genotype VI Newcastle disease viruses from formalin-fixed paraffin-embedded tissues from wild pigeons reveals continuous evolution and previously unrecognized genetic diversity in the U.S.

Natural Infections With Pigeon Paramyxovirus Serotype 1: Pathologic Changes in Eurasian Collared-Doves (Streptopelia decaocto) and Rock Pigeons (Columba livia) in the United States

(2017) M. Isidoro-Ayza et al.   VETERINARY PATHOLOGY

A robust and cost-effective approach to sequence and analyze complete genomes of small RNA viruses

(2017) Kiril M. Dimitrov et al.   Virology Journal

Temporal, geographic, and host distribution of avian paramyxovirus 1 (Newcastle disease virus)

(2016) Kiril M. Dimitrov et al.   INFECTION GENETICS AND EVOLUTION

Newcastle Disease Viruses Causing Recent Outbreaks Worldwide Show Unexpectedly High Genetic Similarity to Historical Virulent Isolates from the 1940s

(2016) Kiril M. Dimitrov et al.   JOURNAL OF CLINICAL MICROBIOLOGY

Identification of Avian Paramyxovirus Serotype-1 in Wild Birds in the USA

(2016) Kerri Pedersen et al.   JOURNAL OF WILDLIFE DISEASES

The Galaxy platform for accessible, reproducible and collaborative biomedical analyses: 2016 update

(2016) Enis Afgan et al.   NUCLEIC ACIDS RESEARCH

Presence of Vaccine-Derived Newcastle Disease Viruses in Wild Birds

(2016) Andrea J. Ayala et al.   PLoS One

Presence of Virulent Newcastle Disease Virus in Vaccinated Chickens in Farms in Pakistan

(2015) Shafqat Fatima Rehmani et al.   JOURNAL OF CLINICAL MICROBIOLOGY

Robustness of Next Generation Sequencing on Older Formalin-Fixed Paraffin-Embedded Tissue

(2015) Danielle Mercatante Carrick et al.   PLoS One

Simultaneous rapid sequencing of multiple RNA virus genomes

(2014) John D. Neill et al.   JOURNAL OF VIROLOGICAL METHODS

Archived Formalin-Fixed Paraffin-Embedded (FFPE) Blocks: A Valuable Underexploited Resource for Extraction of DNA, RNA, and Protein

(2013) Theresa J. Kokkat et al.   BIOPRESERVATION AND BIOBANKING

MEGA6: Molecular Evolutionary Genetics Analysis Version 6.0

(2013) Koichiro Tamura et al.   MOLECULAR BIOLOGY AND EVOLUTION

Expansion of an Exotic Species and Concomitant Disease Outbreaks: Pigeon Paramyxovirus in Free-Ranging Eurasian Collared Doves

(2012) Krysten L. Schuler et al.   EcoHealth

Genetic diversity of avian paramyxovirus type 1: Proposal for a unified nomenclature and classification system of Newcastle disease virus genotypes

(2012) Diego G. Diel et al.   INFECTION GENETICS AND EVOLUTION

MEGA5: Molecular Evolutionary Genetics Analysis Using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony Methods

(2011) K. Tamura et al.   MOLECULAR BIOLOGY AND EVOLUTION

Hierarchical modeling of an invasive spread: the Eurasian Collared-Dove Streptopelia decaocto in the United States

(2010) Florent Bled et al.   ECOLOGICAL APPLICATIONS

Two genetically closely related pigeon paramyxovirus type 1 (PPMV-1) variants with identical velogenic fusion protein cleavage sites but with strongly contrasting virulence

(2009) Jos C.F.M. Dortmans et al.   VETERINARY MICROBIOLOGY

Biological and Phylogenetic Characterization of Pigeon Paramyxovirus Serotype 1 Circulating in Wild North American Pigeons and Doves

(2008) L. M. Kim et al.   JOURNAL OF CLINICAL MICROBIOLOGY