Enterohaemorrhagic and other Shiga toxin-producing Escherichia coli (STEC): Where are we now regarding diagnostics and control strategies?

An electrochemical immunosensor for sensitive detection of Escherichia coli O157:H7 by using chitosan, MWCNT, polypyrrole with gold nanoparticles hybrid sensing platform

(2017) Ahmet Güner et al.   FOOD CHEMISTRY

Microbial sequence typing in the genomic era

(2017) Marcos Pérez-Losada et al.   INFECTION GENETICS AND EVOLUTION

Validation and Implementation of Clinical Laboratory Improvements Act-Compliant Whole-Genome Sequencing in the Public Health Microbiology Laboratory

(2017) Varvara K. Kozyreva et al.   JOURNAL OF CLINICAL MICROBIOLOGY

PMA-LAMP for rapid detection of Escherichia coli and shiga toxins from viable but non-culturable state

(2017) Muxia Yan et al.   MICROBIAL PATHOGENESIS

Strategy for Accurate Detection of Escherichia coli O157:H7 in Ground Pork Using a Lateral Flow Immunoassay

(2017) Song Cheng et al.   SENSORS

The Escherichia coli Serogroup O1 and O2 Lipopolysaccharides Are Encoded by Multiple O-antigen Gene Clusters

(2017) Sabine Delannoy et al.   Frontiers in Cellular and Infection Microbiology

Factors Associated with Shiga Toxin-Producing Escherichia coli Shedding by Dairy and Beef Cattle

(2016) Cristina Venegas-Vargas et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

A System Model for Understanding the Role of Animal Feces as a Route of Contamination of Leafy Greens before Harvest

(2016) Abhinav Mishra et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Benchmarking of de novo assembly algorithms for Nanopore data reveals optimal performance of OLC approaches

(2016) Yesesri Cherukuri et al.   BMC GENOMICS

Molecular characterization and phylogeny of Shiga toxin–producing Escherichia coli isolates obtained from two Dutch regions using whole genome sequencing

(2016) M. Ferdous et al.   CLINICAL MICROBIOLOGY AND INFECTION

Effect of Lactobacillus Strains on Intestinal Microflora and Mucosa Immunity in Escherichia coli O157:H7-Induced Diarrhea in Mice

(2016) Xin Bian et al.   CURRENT MICROBIOLOGY

A geostatistical investigation of agricultural and infrastructural risk factors associated with primary verotoxigenic E. coli (VTEC) infection in the Republic of Ireland, 2008–2013

(2016) C. ÓHAISEADHA et al.   EPIDEMIOLOGY AND INFECTION

A longitudinal study of risk factors for shedding of VTEC O157 by young cattle in herds with known E. coli O157 carriage

(2016) R. P. SMITH et al.   EPIDEMIOLOGY AND INFECTION

Nationwide prevalence and risk factors for faecal carriage of Escherichia coli O157 and O26 in very young calves and adult cattle at slaughter in New Zealand

(2016) P. JAROS et al.   EPIDEMIOLOGY AND INFECTION

Community-wide outbreaks of haemolytic uraemic syndrome associated with Shiga toxin-producing Escherichia coli O26 in Italy and Romania: a new challenge for the European Union

(2016) Ettore Severi et al.   Eurosurveillance

Aggregative adherence fimbriae I (AAF/I) mediate colonization of fresh produce and abiotic surface by Shiga toxigenic enteroaggregative Escherichia coli O104:H4

(2016) Attila Nagy et al.   INTERNATIONAL JOURNAL OF FOOD MICROBIOLOGY

Identification of bacterial pathogens and antimicrobial resistance directly from clinical urines by nanopore-based metagenomic sequencing

(2016) K. Schmidt et al.   JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY

Pooling of Immunomagnetic Separation Beads Does Not Affect Detection Sensitivity of Six Major Serogroups of Shiga Toxin–Producing Escherichia coli in Cattle Feces

(2016) LANCE W. NOLL et al.   JOURNAL OF FOOD PROTECTION

A highly specific and sensitive loop-mediated isothermal amplification method for the detection of Escherichia coli O157:H7

(2016) Hadi Ravan et al.   MICROBIAL PATHOGENESIS

Support vector machine applied to predict the zoonotic potential ofE. coliO157 cattle isolates

(2016) Nadejda Lupolova et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Phylogenomic approaches to determine the zoonotic potential of Shiga toxin-producing Escherichia coli (STEC) isolated from Zambian dairy cattle

(2016) Geoffrey Mainda et al.   Scientific Reports

Presence of pathogenic Escherichia coli is correlated with bacterial community diversity and composition on pre-harvest cattle hides

(2016) Jessica Chopyk et al.   Microbiome

A New Immunoassay for Detecting All Subtypes of Shiga Toxins Produced by Shiga Toxin-Producing E. coli in Ground Beef

(2016) Xiaohua He et al.   PLoS One

Disease Burden of 32 Infectious Diseases in the Netherlands, 2007-2011

(2016) Alies van Lier et al.   PLoS One

Recent trends in the detection of pathogenic Escherichia coli O157 : H7

(2015) Si-Ying Wu et al.   BioChip Journal

Analysis of whole genome sequencing for the Escherichia coli O157:H7 typing phages

(2015) Lauren A Cowley et al.   BMC GENOMICS

Whole-Genome Sequencing for National Surveillance of Shiga Toxin–ProducingEscherichia coliO157

(2015) Timothy J. Dallman et al.   CLINICAL INFECTIOUS DISEASES

Verotoxigenic Escherichia coli transmission in Ireland: a review of notified outbreaks, 2004–2012

(2015) P. GARVEY et al.   EPIDEMIOLOGY AND INFECTION

Perspectives on Super-Shedding ofEscherichia coliO157:H7 by Cattle

(2015) Krysty D. Munns et al.   Foodborne Pathogens and Disease

Assessing the Public Health Risk of Shiga Toxin-Producing Escherichia coli by Use of a Rapid Diagnostic Screening Algorithm

(2015) Richard F. de Boer et al.   JOURNAL OF CLINICAL MICROBIOLOGY

Utility of Whole-Genome Sequencing of Escherichia coli O157 for Outbreak Detection and Epidemiological Surveillance

(2015) Anne Holmes et al.   JOURNAL OF CLINICAL MICROBIOLOGY

Genotypic relatedness and characterization of Staphylococcus pseudintermedius associated with post-operative surgical infections in dogs

(2015) Onyinye Diribe et al.   JOURNAL OF MEDICAL MICROBIOLOGY

‘Super' or just ‘above average'? Supershedders and the transmission ofEscherichia coliO157:H7 among feedlot cattle

(2015) Simon E. F. Spencer et al.   Journal of the Royal Society Interface

Shiga toxins and stx phages: highly diverse entities

(2015) Alejandra Krüger et al.   MICROBIOLOGY-SGM

Antibodies Directed against Shiga-Toxin Producing Escherichia coli Serotype O103 Type III Secreted Proteins Block Adherence of Heterologous STEC Serotypes to HEp-2 Cells

(2015) Taseen S. Desin et al.   PLoS One

World Health Organization Global Estimates and Regional Comparisons of the Burden of Foodborne Disease in 2010

(2015) Arie H. Havelaar et al.   PLOS MEDICINE

Bacterial and viral identification and differentiation by amplicon sequencing on the MinION nanopore sequencer

(2015) Andy Kilianski et al.   GigaScience

Molecular Hazard Identification of Non-O157 Shiga Toxin-Producing Escherichia coli (STEC)

(2015) Eelco Franz et al.   PLoS One

Genetic Diversity and Virulence Potential of Shiga Toxin-Producing Escherichia coli O113:H21 Strains Isolated from Clinical, Environmental, and Food Sources

(2014) Peter C. H. Feng et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Escherichia coli O157: Insights into the adaptive stress physiology and the influence of stressors on epidemiology and ecology of this human pathogen

(2014) Sinisa Vidovic et al.   CRITICAL REVIEWS IN MICROBIOLOGY

Defining pathogenic verocytotoxin-producing Escherichia coli (VTEC) from cases of human infection in the European Union, 2007–2010

(2014) W. MESSENS et al.   EPIDEMIOLOGY AND INFECTION

Risk factors for Escherichia coli O157 shedding and super-shedding by dairy heifers at pasture

(2014) K. J. WILLIAMS et al.   EPIDEMIOLOGY AND INFECTION

Global Incidence of Human Shiga Toxin–Producing Escherichia coli Infections and Deaths: A Systematic Review and Knowledge Synthesis

(2014) Shannon E. Majowicz et al.   Foodborne Pathogens and Disease

Enumeration of verocytotoxigenic Escherichia coli (VTEC) O157 and O26 in milk by quantitative PCR

(2014) Rocco Mancusi et al.   INTERNATIONAL JOURNAL OF FOOD MICROBIOLOGY

Epidemiology and microbiology of Shiga toxin-producing Escherichia coli other than serogroup O157 in England, 2009-2013

(2014) L. Byrne et al.   JOURNAL OF MEDICAL MICROBIOLOGY

Design and application of a loop-mediated isothermal amplification assay for the rapid detection of Staphylococcus pseudintermedius

(2014) Onyinye Diribe et al.   JOURNAL OF VETERINARY DIAGNOSTIC INVESTIGATION

Development of a multiplex loop-mediated isothermal amplification assay to detect shiga toxin-producingEscherichia coliin cattle

(2014) Hee-Jin Dong et al.   Journal of Veterinary Science

Pre- and post-harvest interventions to reduce pathogen contamination in the U.S. beef industry

(2014) T.L. Wheeler et al.   MEAT SCIENCE

The Use of Direct-Fed Microbials to Reduce Shedding ofEscherichia coliO157 in Beef Cattle: A Systematic Review and Meta-analysis

(2014) L. V. Wisener et al.   Zoonoses and Public Health

A novel enzyme-linked immunosorbent assay for detection of Escherichia coli O157:H7 using immunomagnetic and beacon gold nanoparticles

(2014) Zhiqiang Shen et al.   Gut Pathogens

A qPCR Assay to Detect and Quantify Shiga Toxin-Producing E. coli (STEC) in Cattle and on Farms: A Potential Predictive Tool for STEC Culture-Positive Farms

(2014) Karen Verstraete et al.   Toxins

Characterization of Escherichia coli O157:H7 Strains Isolated from Supershedding Cattle

(2013) T. M. Arthur et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Interventions for preventing diarrhea-associated hemolytic uremic syndrome: systematic review

(2013) Diana E Thomas et al.   BMC PUBLIC HEALTH

Rapid bacterial genome sequencing: methods and applications in clinical microbiology

(2013) C. Bertelli et al.   CLINICAL MICROBIOLOGY AND INFECTION

Fate ofEscherichia coliO157:H7 andSalmonella entericain the manure-amended soil-plant ecosystem of fresh vegetable crops: A review

(2013) Duncan Ongeng et al.   CRITICAL REVIEWS IN MICROBIOLOGY

Use of virulence determinants and seropathotypes to distinguish high- and low-risk Escherichia coli O157 and non-O157 isolates from Europe

(2013) M. F. ANJUM et al.   EPIDEMIOLOGY AND INFECTION

Discrimination of Enterohemorrhagic Escherichia coli (EHEC) from Non-EHEC Strains Based on Detection of Various Combinations of Type III Effector Genes

(2013) S. Delannoy et al.   JOURNAL OF CLINICAL MICROBIOLOGY

Evaluation of CHROMagar STEC and STEC O104 Chromogenic Agar Media for Detection of Shiga Toxin-Producing Escherichia coli in Stool Specimens

(2013) Malika Gouali et al.   JOURNAL OF CLINICAL MICROBIOLOGY

The Endophytic Lifestyle ofEscherichia coliO157:H7: Quantification and Internal Localization in Roots

(2013) Kathryn M. Wright et al.   PHYTOPATHOLOGY

Shiga Toxin-Producing Escherichia coli O157 Is More Likely to Lead to Hospitalization and Death than Non-O157 Serogroups – Except O104

(2013) Karina Preußel et al.   PLoS One

F18ab Escherichia coli flagella expression is regulated by acyl-homoserine lactone and contributes to bacterial virulence

(2013) Yang Yang et al.   VETERINARY MICROBIOLOGY

Rapid and Specific Detection of Escherichia coli Serogroups O26, O45, O103, O111, O121, O145, and O157 in Ground Beef, Beef Trim, and Produce by Loop-Mediated Isothermal Amplification

(2012) Fei Wang et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Role of Lipid Rafts and Flagellin in Invasion of Colonic Epithelial Cells by Shiga-Toxigenic Escherichia coli O113:H21

(2012) Trisha J. Rogers et al.   INFECTION AND IMMUNITY

Multicenter Evaluation of a Sequence-Based Protocol for Subtyping Shiga Toxins and Standardizing Stx Nomenclature

(2012) F. Scheutz et al.   JOURNAL OF CLINICAL MICROBIOLOGY

The evolution of metabolic networks of E. coli

(2011) David J Baumler et al.   BMC Systems Biology

Loop-Mediated Isothermal Amplification Assays for Detecting Shiga Toxin-Producing Escherichia coli in Ground Beef and Human Stools

(2011) Fei Wang et al.   JOURNAL OF CLINICAL MICROBIOLOGY

Origins of theE. coliStrain Causing an Outbreak of Hemolytic–Uremic Syndrome in Germany

(2011) David A. Rasko et al.   NEW ENGLAND JOURNAL OF MEDICINE

Epidemic Profile of Shiga-Toxin–ProducingEscherichia coliO104:H4 Outbreak in Germany

(2011) Christina Frank et al.   NEW ENGLAND JOURNAL OF MEDICINE

Microarray based comparative genotyping of gentamicin resistant Escherichia coli strains from food animals and humans

(2011) Ama Szmolka et al.   VETERINARY MICROBIOLOGY

A Systematic Review of Vaccinations to Reduce the Shedding of Escherichia coli O157 in the Faeces of Domestic Ruminants

(2011) K. G. Snedeker et al.   Zoonoses and Public Health

Acute Neurological Involvement in Diarrhea-Associated Hemolytic Uremic Syndrome

(2010) S. Nathanson et al.   Clinical Journal of the American Society of Nephrology

Antibacterial activity of decontamination treatments for cattle hides and beef carcasses

(2010) Marianne Loretz et al.   FOOD CONTROL

Food-borne diseases — The challenges of 20years ago still persist while new ones continue to emerge

(2010) Diane G. Newell et al.   INTERNATIONAL JOURNAL OF FOOD MICROBIOLOGY

Escherichia coli O157

(2010) Hugh Pennington   LANCET

Super shedding of Escherichia coli O157:H7 by cattle and the impact on beef carcass contamination

(2010) Terrance M. Arthur et al.   MEAT SCIENCE

Comparison of 61 Sequenced Escherichia coli Genomes

(2010) Oksana Lukjancenko et al.   MICROBIAL ECOLOGY

Longitudinal Study of Escherichia coli O157:H7 in a Beef Cattle Feedlot and Role of High-Level Shedders in Hide Contamination

(2009) T. M. Arthur et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Cryptic Lineages of the Genus Escherichia

(2009) S. T. Walk et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

TheEscherichia coliO157:H7 EhaB autotransporter protein binds to laminin and collagen I and induces a serum IgA response in O157:H7 challenged cattle

(2009) Timothy J. Wells et al.   ENVIRONMENTAL MICROBIOLOGY

Immunization of cattle with a combination of purified intimin-531, EspA and Tir significantly reduces shedding of Escherichia coli O157:H7 following oral challenge

(2009) Tom N. McNeilly et al.   VACCINE

Evaluation of Major Types of Shiga Toxin 2e-Producing Escherichia coli Bacteria Present in Food, Pigs, and the Environment as Potential Pathogens for Humans

(2008) L. Beutin et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

An investigation of the expression and adhesin function of H7 flagella in the interaction ofEscherichia coliO157 : H7 with bovine intestinal epithelium

(2008) Arvind Mahajan et al.   CELLULAR MICROBIOLOGY

Human infections with verocytotoxin-producing Escherichia coli O157 - 10 years of E. coli O157 serodiagnosis

(2008) H. Chart et al.   JOURNAL OF MEDICAL MICROBIOLOGY

Super-shedding and the link between human infection and livestock carriage of Escherichia coli O157

(2008) Margo Chase-Topping et al.   NATURE REVIEWS MICROBIOLOGY

IntermittentEscherichia coli O157:H7 colonisation at the terminal rectum mucosa of conventionally-reared lambs

(2008) Angus Best et al.   VETERINARY RESEARCH