Optimal cross selection for long-term genetic gain in two-part programs with rapid recurrent genomic selection

AlphaMate: a program for optimizing selection, maintenance of diversity and mate allocation in breeding programs

(2018) Gregor Gorjanc et al.   BIOINFORMATICS

Speed breeding for multiple disease resistance in barley

(2017) Lee T. Hickey et al.   EUPHYTICA

Moving Beyond Managing Realized Genomic Relationship in Long-Term Genomic Selection

(2017) Herman De Beukelaer et al.   GENETICS

Genomic prediction unifies animal and plant breeding programs to form platforms for biological discovery

(2017) John M Hickey et al.   NATURE GENETICS

Mitigation of inbreeding while preserving genetic gain in genomic breeding programs for outbred plants

(2017) Zibei Lin et al.   THEORETICAL AND APPLIED GENETICS

Which Individuals To Choose To Update the Reference Population? Minimizing the Loss of Genetic Diversity in Animal Genomic Selection Programs

(2017) Sonia E. Eynard et al.   G3-Genes Genomes Genetics

Moving Beyond Managing Realized Genomic Relationship in Long-Term Genomic Selection

(2017) Herman De Beukelaer et al.   GENETICS

Is Continued Genetic Improvement of Livestock Sustainable?

(2016) W. G. Hill   GENETICS

Evolving gene banks: improving diverse populations of crop and exotic germplasm with optimal contribution selection

(2016) W.A. Cowling et al.   JOURNAL OF EXPERIMENTAL BOTANY

The effect of gene interactions on the long-term response to selection

(2016) Tiago Paixão et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Genomic selection across multiple breeding cycles in applied bread wheat breeding

(2016) Sebastian Michel et al.   THEORETICAL AND APPLIED GENETICS

Using Genetic Distance to Infer the Accuracy of Genomic Prediction

(2016) Marco Scutari et al.   PLoS Genetics

Efficient Breeding by Genomic Mating

(2016) Deniz Akdemir et al.   Frontiers in Genetics

Imputation of Single Nucleotide Polymorphism Genotypes in Biparental, Backcross, and Topcross Populations with a Hidden Markov Model

(2015) John M. Hickey et al.   CROP SCIENCE

Genetic contributions and their optimization

(2015) J.A. Woolliams et al.   JOURNAL OF ANIMAL BREEDING AND GENETICS

Marker Imputation Before Genomewide Selection in Biparental Maize Populations

(2015) Amy Jacobson et al.   Plant Genome

Evaluation of Genomic Selection Training Population Designs and Genotyping Strategies in Plant Breeding Programs Using Simulation

(2014) John M. Hickey et al.   CROP SCIENCE

Genomic selection in plant breeding: from theory to practice

(2011) J.-L. Jannink et al.   Briefings in Functional Genomics

Reliability of direct genomic values for animals with different relationships within and to the reference population

(2011) M. Pszczola et al.   JOURNAL OF DAIRY SCIENCE

Ridge Regression and Other Kernels for Genomic Selection with R Package rrBLUP

(2011) Jeffrey B. Endelman   Plant Genome

The impact of genetic relationship information on genome-assisted breeding values

(2007) D. Habier et al.   GENETICS