Observing the cell in its native state: Imaging subcellular dynamics in multicellular organisms

Assessing phototoxicity in live fluorescence imaging

(2017) P Philippe Laissue et al.   NATURE METHODS

Adaptive optical fluorescence microscopy

(2017) Na Ji   NATURE METHODS

A tunable refractive index matching medium for live imaging cells, tissues and model organisms

(2017) Tobias Boothe et al.   eLife

Concerted action of neuroepithelial basal shrinkage and active epithelial migration ensures efficient optic cup morphogenesis

(2017) Jaydeep Sidhaye et al.   eLife

Independent modes of ganglion cell translocation ensure correct lamination of the zebrafish retina

(2016) Jaroslav Icha et al.   JOURNAL OF CELL BIOLOGY

Regulation of clathrin-mediated endocytosis by hierarchical allosteric activation of AP2

(2016) Zuzana Kadlecova et al.   JOURNAL OF CELL BIOLOGY

Membrane dynamics of dividing cells imaged by lattice light-sheet microscopy

(2016) François Aguet et al.   MOLECULAR BIOLOGY OF THE CELL

Adaptive light-sheet microscopy for long-term, high-resolution imaging in living organisms

(2016) Loïc A Royer et al.   NATURE BIOTECHNOLOGY

Adaptive illumination based on direct wavefront sensing in a light-sheet fluorescence microscope

(2016) Dean Wilding et al.   OPTICS EXPRESS

Using Light Sheet Fluorescence Microscopy to Image Zebrafish Eye Development

(2016) Jaroslav Icha et al.   Jove-Journal of Visualized Experiments

Interkinetic Nuclear Migration Is Centrosome Independent and Ensures Apical Cell Division to Maintain Tissue Integrity

(2015) Paulina J. Strzyz et al.   DEVELOPMENTAL CELL

Whole-animal functional and developmental imaging with isotropic spatial resolution

(2015) Raghav K Chhetri et al.   NATURE METHODS

Improved Long-Term Imaging of Embryos with Genetically Encoded α-Bungarotoxin

(2015) Ian A. Swinburne et al.   PLoS One

Extended-resolution structured illumination imaging of endocytic and cytoskeletal dynamics

(2015) D. Li et al.   SCIENCE

Novel Transgenic Lines to Fluorescently Label Clathrin and Caveolin Endosomes in Live Zebrafish

(2015) Federica Arbizzani et al.   Zebrafish

Interplay of Cell Shape and Division Orientation Promotes Robust Morphogenesis of Developing Epithelia

(2014) Fengzhu Xiong et al.   CELL

Actin scaffolding by clathrin heavy chain is required for skeletal muscle sarcomere organization

(2014) Stéphane Vassilopoulos et al.   JOURNAL OF CELL BIOLOGY

Rapid adaptive optical recovery of optimal resolution over large volumes

(2014) Kai Wang et al.   NATURE METHODS

Dual-view plane illumination microscopy for rapid and spatially isotropic imaging

(2014) Abhishek Kumar et al.   Nature Protocols

Lattice light-sheet microscopy: Imaging molecules to embryos at high spatiotemporal resolution

(2014) Bi-Chang Chen et al.   SCIENCE

Sample Drift Correction Following 4D Confocal Time-lapse Imaging

(2014) Adam Parslow et al.   Jove-Journal of Visualized Experiments

Human Intestinal Tissue with Adult Stem Cell Properties Derived from Pluripotent Stem Cells

(2014) Ryan Forster et al.   Stem Cell Reports

Specified Neural Progenitors Sort to Form Sharp Domains after Noisy Shh Signaling

(2013) Fengzhu Xiong et al.   CELL

The netrin receptor DCC focuses invadopodia-driven basement membrane transmigration in vivo

(2013) Elliott J. Hagedorn et al.   JOURNAL OF CELL BIOLOGY

Whole-brain functional imaging at cellular resolution using light-sheet microscopy

(2013) Misha B Ahrens et al.   NATURE METHODS

Improved tools for the Brainbow toolbox

(2013) Dawen Cai et al.   NATURE METHODS

In vitro expansion and genetic modification of gastrointestinal stem cells in spheroid culture

(2013) Hiroyuki Miyoshi et al.   Nature Protocols

A fast algorithm for computation of discrete Euclidean distance transform in three or more dimensions on vector processing architectures

(2013) Yuriy Mishchenko   Signal Image and Video Processing

Modelling of multi-conjugate adaptive optics for spatially variant aberrations in microscopy

(2013) Richard D Simmonds et al.   Journal of Optics

Quantitative high-speed imaging of entire developing embryos with simultaneous multiview light-sheet microscopy

(2012) Raju Tomer et al.   NATURE METHODS

Fiji: an open-source platform for biological-image analysis

(2012) Johannes Schindelin et al.   NATURE METHODS

3D adaptive optics in a light sheet microscope

(2012) Cyril Bourgenot et al.   OPTICS EXPRESS

Dynamics of Intracellular Clathrin/AP1- and Clathrin/AP3-Containing Carriers

(2012) Comert Kural et al.   Cell Reports

ACME: Automated Cell Morphology Extractor for Comprehensive Reconstruction of Cell Membranes

(2012) Kishore R. Mosaliganti et al.   PLoS Computational Biology

Intravital Imaging

(2011) Mikael J. Pittet et al.   CELL

Genetic engineering of human pluripotent cells using TALE nucleases

(2011) Dirk Hockemeyer et al.   NATURE BIOTECHNOLOGY

Rapid and efficient clathrin-mediated endocytosis revealed in genome-edited mammalian cells

(2011) Jeffrey B. Doyon et al.   NATURE CELL BIOLOGY

A structural and functional ground plan for neurons in the hindbrain of zebrafish

(2011) A. Kinkhabwala et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Measurement and correction of in vivo sample aberrations employing a nonlinear guide-star in two-photon excited fluorescence microscopy

(2011) Rodrigo Aviles-Espinosa et al.   Biomedical Optics Express

Distributed gradient-domain processing of planar and spherical images

(2010) Michael Kazhdan et al.   ACM TRANSACTIONS ON GRAPHICS

Intravital microscopy: a novel tool to study cell biology in living animals

(2010) Roberto Weigert et al.   HISTOCHEMISTRY AND CELL BIOLOGY

Visualizing extravasation dynamics of metastatic tumor cells

(2010) K. Stoletov et al.   JOURNAL OF CELL SCIENCE

Dually inducible TetON systems for tissue-specific conditional gene expression in zebrafish

(2010) F. Knopf et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Globally optimal stitching of tiled 3D microscopic image acquisitions

(2009) S. Preibisch et al.   BIOINFORMATICS

Parkinson's Disease Patient-Derived Induced Pluripotent Stem Cells Free of Viral Reprogramming Factors

(2009) Frank Soldner et al.   CELL

Cisternal Organization of the Endoplasmic Reticulum during Mitosis

(2009) Lei Lu et al.   MOLECULAR BIOLOGY OF THE CELL

Enzymatic assembly of DNA molecules up to several hundred kilobases

(2009) Daniel G Gibson et al.   NATURE METHODS

The trip of the tip: understanding the growth cone machinery

(2009) Laura Anne Lowery et al.   NATURE REVIEWS MOLECULAR CELL BIOLOGY

Robust single-particle tracking in live-cell time-lapse sequences

(2008) Khuloud Jaqaman et al.   NATURE METHODS