SAM-VI RNAs selectively bind S-adenosylmethionine and exhibit similarities to SAM-III riboswitches

Metabolism of Free Guanidine in Bacteria Is Regulated by a Widespread Riboswitch Class

(2017) James W. Nelson et al.   MOLECULAR CELL

Detection of 224 candidate structured RNAs by comparative analysis of specific subsets of intergenic regions

(2017) Zasha Weinberg et al.   NUCLEIC ACIDS RESEARCH

Bioinformatic analysis of riboswitch structures uncovers variant classes with altered ligand specificity

(2017) Zasha Weinberg et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Riboswitch diversity and distribution

(2017) Phillip J. McCown et al.   RNA

Riboswitch-Mediated Gene Regulation: Novel RNA Architectures Dictate Gene Expression Responses

(2016) Anna V. Sherwood et al.   Annual Review of Microbiology

New classes of self-cleaving ribozymes revealed by comparative genomics analysis

(2015) Zasha Weinberg et al.   Nature Chemical Biology

Themes and variations in riboswitch structure and function

(2014) Alla Peselis et al.   Biochimica et Biophysica Acta-Gene Regulatory Mechanisms

Structural, Functional, and Taxonomic Diversity of Three PreQ1 Riboswitch Classes

(2014) Phillip J. McCown et al.   CHEMISTRY & BIOLOGY

Infernal 1.1: 100-fold faster RNA homology searches

(2013) E. P. Nawrocki et al.   BIOINFORMATICS

R2R - software to speed the depiction of aesthetic consensus RNA secondary structures

(2011) Zasha Weinberg et al.   BMC BIOINFORMATICS

Prospects for Riboswitch Discovery and Analysis

(2011) Ronald R. Breaker   MOLECULAR CELL

Identification of Hammerhead Ribozymes in All Domains of Life Reveals Novel Structural Variations

(2011) Jonathan Perreault et al.   PLoS Computational Biology

An Allosteric Self-Splicing Ribozyme Triggered by a Bacterial Second Messenger

(2010) E. R. Lee et al.   SCIENCE

Riboswitches: Structures and Mechanisms

(2010) A. D. Garst et al.   Cold Spring Harbor Perspectives in Biology

Comparative genomics reveals 104 candidate structured RNAs from bacteria, archaea, and their metagenomes

(2010) Zasha Weinberg et al.   GENOME BIOLOGY

A variant riboswitch aptamer class for S-adenosylmethionine common in marine bacteria

(2009) E. Poiata et al.   RNA

Riboswitches that sense S-adenosylmethionine and S-adenosylhomocysteineThis paper is one of a selection of papers published in this Special Issue, entitled CSBMCB — Systems and Chemical Biology, and has undergone the Journal's usual peer review process.

(2008) Joy Xin Wang et al.   Biochemistry and Cell Biology

Riboswitches that Sense S-adenosylhomocysteine and Activate Genes Involved in Coenzyme Recycling

(2008) Joy Xin Wang et al.   MOLECULAR CELL

Crystal structures of the SAM-III/SMK riboswitch reveal the SAM-dependent translation inhibition mechanism

(2008) Changrui Lu et al.   NATURE STRUCTURAL & MOLECULAR BIOLOGY

Confirmation of a second natural preQ1 aptamer class in Streptococcaceae bacteria

(2008) M. M. Meyer et al.   RNA

The aptamer core of SAM-IV riboswitches mimics the ligand-binding site of SAM-I riboswitches

(2008) Z. Weinberg et al.   RNA

Riboswitches in Eubacteria Sense the Second Messenger Cyclic Di-GMP

(2008) N. Sudarsan et al.   SCIENCE