Identification of a ubiquitin-binding interface using Rosetta and DEER

Cooperative Substrate-Cofactor Interactions and Membrane Localization of the Bacterial Phospholipase A2(PLA2) Enzyme, ExoU

(2017) Maxx H. Tessmer et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Protocols for Molecular Modeling with Rosetta3 and RosettaScripts

(2016) Brian J. Bender et al.   BIOCHEMISTRY

Actin activates Pseudomonas aeruginosa ExoY nucleotidyl cyclase toxin and ExoY-like effector domains from MARTX toxins

(2016) Alexander Belyy et al.   Nature Communications

Pseudomonas aeruginosa: Evolution of Antimicrobial Resistance and Implications for Therapy

(2015) Kate McCarthy   SEMINARS IN RESPIRATORY AND CRITICAL CARE MEDICINE

Cross Kingdom Activators of Five Classes of Bacterial Effectors

(2015) David M. Anderson et al.   PLoS Pathogens

Ubiquitin Activates Patatin-Like Phospholipases from Multiple Bacterial Species

(2014) David M. Anderson et al.   JOURNAL OF BACTERIOLOGY

A Novel Phosphatidylinositol 4,5-Bisphosphate Binding Domain Mediates Plasma Membrane Localization of ExoU and Other Patatin-like Phospholipases

(2014) Gregory H. Tyson et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Structural Systems Pharmacology: The Role of 3D Structures in Next-Generation Drug Development

(2013) Miquel Duran-Frigola et al.   CHEMISTRY & BIOLOGY

Towards a detailed atlas of protein–protein interactions

(2013) Roberto Mosca et al.   CURRENT OPINION IN STRUCTURAL BIOLOGY

Identification of the Major Ubiquitin-binding Domain of thePseudomonas aeruginosaExoU A2Phospholipase

(2013) David M. Anderson et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Cross-Link Guided Molecular Modeling with ROSETTA

(2013) Abdullah Kahraman et al.   PLoS One

MtsslWizard: In Silico Spin-Labeling and Generation of Distance Distributions in PyMOL

(2012) Gregor Hagelueken et al.   APPLIED MAGNETIC RESONANCE

Advances in integrative modeling of biomolecular complexes

(2012) Ezgi Karaca et al.   METHODS

Structure of the Type III Secretion Effector Protein ExoU in Complex with Its Chaperone SpcU

(2012) Andrei S. Halavaty et al.   PLoS One

Structural Basis of Cytotoxicity Mediated by the Type III Secretion Toxin ExoU from Pseudomonas aeruginosa

(2012) Claire Gendrin et al.   PLoS Pathogens

Five Mechanisms of Manipulation by Bacterial Effectors: A Ubiquitous Theme

(2012) David M. Anderson et al.   PLoS Pathogens

Induced Conformational Changes in the Activation of the Pseudomonas aeruginosa type III Toxin, ExoU

(2011) Marc A. Benson et al.   BIOPHYSICAL JOURNAL

Ubiquitin and ubiquitin-modified proteins activate the Pseudomonas aeruginosa T3SS cytotoxin, ExoU

(2011) David M. Anderson et al.   MOLECULAR MICROBIOLOGY

Protein standard absolute quantification (PSAQ) method for the measurement of cellular ubiquitin pools

(2011) Stephen E Kaiser et al.   NATURE METHODS

Pseudomonas Aeruginosa: Resistance to the Max

(2011) Keith Poole   Frontiers in Microbiology

RosettaEPR: An integrated tool for protein structure determination from sparse EPR data

(2010) Stephanie J. Hirst et al.   JOURNAL OF STRUCTURAL BIOLOGY

Role of conformational sampling in computing mutation-induced changes in protein structure and stability

(2010) Elizabeth H. Kellogg et al.   PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS

A sensitive fluorescence-based assay for the detection of ExoU-mediated PLA2 activity

(2009) Marc A. Benson et al.   CLINICA CHIMICA ACTA

Ubiquitin-binding domains — from structures to functions

(2009) Ivan Dikic et al.   NATURE REVIEWS MOLECULAR CELL BIOLOGY

Consistent blind protein structure generation from NMR chemical shift data

(2008) Y. Shen et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Incorporating high-throughput proteomics experiments into structural biology pipelines: Identification of the low-hanging fruits

(2008) Roland A. Pache et al.   PROTEOMICS

De Novo High-Resolution Protein Structure Determination from Sparse Spin-Labeling EPR Data

(2008) Nathan Alexander et al.   STRUCTURE