Differences in the intestinal microbiota between uninfected piglets and piglets infected with porcine epidemic diarrhea virus

Development of intestinal microflora and occurrence of diarrhoea in sucking foals: effects of Bacillus cereus var. toyoi supplementation

(2015) Jenny John et al.   BMC Veterinary Research

Porcine epidemic diarrhea virus infection: Etiology, epidemiology, pathogenesis and immunoprophylaxis

(2015) Kwonil Jung et al.   VETERINARY JOURNAL

Molecular Characterization and Phylogenetic Analysis of Porcine Epidemic Diarrhea Viruses Associated with Outbreaks of Severe Diarrhea in Piglets in Jiangxi, China 2013

(2015) Deping Song et al.   PLoS One

The Dynamic Distribution of Porcine Microbiota across Different Ages and Gastrointestinal Tract Segments

(2015) Wenjing Zhao et al.   PLoS One

An evaluation of contaminated complete feed as a vehicle for porcine epidemic diarrhea virus infection of naïve pigs following consumption via natural feeding behavior: proof of concept

(2014) Scott Dee et al.   BMC Veterinary Research

Human milk oligosaccharides shorten rotavirus-induced diarrhea and modulate piglet mucosal immunity and colonic microbiota

(2014) Min Li et al.   ISME Journal

Role of the intestinal microbiota and fecal transplantation in inflammatory bowel diseases

(2014) Jie Liang et al.   Journal of Digestive Diseases

Viral metagenomics analysis demonstrates the diversity of viral flora in piglet diarrhoeic faeces in China

(2014) B. Zhang et al.   JOURNAL OF GENERAL VIROLOGY

Effect of dietary protein supply originating from soybean meal or casein on the intestinal microbiota of piglets

(2013) Vanessa T.S. Rist et al.   ANAEROBE

Isolation and Characterization of Porcine Epidemic Diarrhea Viruses Associated with the 2013 Disease Outbreak among Swine in the United States

(2013) Q. Chen et al.   JOURNAL OF CLINICAL MICROBIOLOGY

De novo Semi-alignment of 16S rRNA Gene Sequences for Deep Phylogenetic Characterization of Next Generation Sequencing Data

(2013) Ekaterina Avershina et al.   MICROBES AND ENVIRONMENTS

Predictive functional profiling of microbial communities using 16S rRNA marker gene sequences

(2013) Morgan G I Langille et al.   NATURE BIOTECHNOLOGY

UPARSE: highly accurate OTU sequences from microbial amplicon reads

(2013) Robert C Edgar   NATURE METHODS

Practical innovations for high-throughput amplicon sequencing

(2013) Derek S Lundberg et al.   NATURE METHODS

Fecal Microbial Diversity in Pre-Weaned Dairy Calves as Described by Pyrosequencing of Metagenomic 16S rDNA. Associations of Faecalibacterium Species with Health and Growth

(2013) Georgios Oikonomou et al.   PLoS One

Porcine epidemic diarrhoea virus: a comprehensive review of molecular epidemiology, diagnosis, and vaccines

(2012) Daesub Song et al.   VIRUS GENES

UCHIME improves sensitivity and speed of chimera detection

(2011) Robert C. Edgar et al.   BIOINFORMATICS

Modulation of immune homeostasis by commensal bacteria

(2011) Ivaylo I Ivanov et al.   CURRENT OPINION IN MICROBIOLOGY

Chimeric 16S rRNA sequence formation and detection in Sanger and 454-pyrosequenced PCR amplicons

(2011) B. J. Haas et al.   GENOME RESEARCH

Illumina-based analysis of microbial community diversity

(2011) Patrick H Degnan et al.   ISME Journal

Molecular epidemiology of porcine epidemic diarrhea virus in China

(2010) Jianfei Chen et al.   ARCHIVES OF VIROLOGY

QIIME allows analysis of high-throughput community sequencing data

(2010) J Gregory Caporaso et al.   NATURE METHODS

Immune Responses to the Microbiota at the Intestinal Mucosal Surface

(2009) Breck A. Duerkop et al.   IMMUNITY