Structures, dynamics, and hydrogen-bond interactions of antifreeze proteins in TIP4P/Ice water and their dependence on force fields

Interfacial Water Arrangement in the Ice-Bound State of an Antifreeze Protein: A Molecular Dynamics Simulation Study

(2017) Uday Sankar Midya et al.   LANGMUIR

Molecular Insight into the Adsorption of Spruce Budworm Antifreeze Protein to an Ice Surface: A Clathrate-Mediated Recognition Mechanism

(2017) Sandipan Chakraborty et al.   LANGMUIR

Janus effect of antifreeze proteins on ice nucleation

(2016) Kai Liu et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Blocking rapid ice crystal growth through nonbasal plane adsorption of antifreeze proteins

(2016) Luuk L. C. Olijve et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Antifreeze Proteins: Characteristics, Function, Mechanism of Action, Sources and Application to Foods

(2015) Nebahat Sule Ustun et al.   JOURNAL OF FOOD PROCESSING AND PRESERVATION

Investigation of the Ice-Binding Site of an Insect Antifreeze Protein Using Sum-Frequency Generation Spectroscopy

(2015) Konrad Meister et al.   Journal of Physical Chemistry Letters

Biophysical and biochemical aspects of antifreeze proteins: Using computational tools to extract atomistic information

(2015) Rajiv K. Kar et al.   PROGRESS IN BIOPHYSICS & MOLECULAR BIOLOGY

The biological function of an insect antifreeze protein simulated by molecular dynamics

(2015) Michael J Kuiper et al.   eLife

Ice-binding proteins that accumulate on different ice crystal planes produce distinct thermal hysteresis dynamics

(2014) R. Drori et al.   Journal of the Royal Society Interface

Observation of ice-like water layers at an aqueous protein surface

(2014) Konrad Meister et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Antifreeze proteins: computer simulation studies on the mechanism of ice growth inhibition

(2012) Hiroki Nada et al.   POLYMER JOURNAL

Towards a Green Hydrate Inhibitor: Imaging Antifreeze Proteins on Clathrates

(2010) Raimond Gordienko et al.   PLoS One

Direct Visualization of Spruce Budworm Antifreeze Protein Interacting with Ice Crystals: Basal Plane Affinity Confers Hyperactivity

(2008) Natalya Pertaya et al.   BIOPHYSICAL JOURNAL

GROMACS 4:  Algorithms for Highly Efficient, Load-Balanced, and Scalable Molecular Simulation

(2008) Berk Hess et al.   Journal of Chemical Theory and Computation

Growth Inhibition Mechanism of an Ice–Water Interface by a Mutant of Winter Flounder Antifreeze Protein: A Molecular Dynamics Study

(2008) Hiroki Nada et al.   JOURNAL OF PHYSICAL CHEMISTRY B

P-LINCS:  A Parallel Linear Constraint Solver for Molecular Simulation

(2007) Berk Hess   Journal of Chemical Theory and Computation