ViroFind: A novel target-enrichment deep-sequencing platform reveals a complex JC virus population in the brain of PML patients

Mechanisms of immune escape in central nervous system infection with neurotropic JC virus variant

(2016) Ivan Jelcic et al.   ANNALS OF NEUROLOGY

Measurements of Intrahost Viral Diversity Are Extremely Sensitive to Systematic Errors in Variant Calling

(2016) John T. McCrone et al.   JOURNAL OF VIROLOGY

Deep-Sequence Identification and Role in Virus Replication of a JC Virus Quasispecies in Patients with Progressive Multifocal Leukoencephalopathy

(2016) Kenta Takahashi et al.   JOURNAL OF VIROLOGY

JC Polyomavirus Abundance and Distribution in Progressive Multifocal Leukoencephalopathy (PML) Brain Tissue Implicates Myelin Sheath in Intracerebral Dissemination of Infection

(2016) Keith A. Wharton et al.   PLoS One

Bioinformatics tools for analysing viral genomic data

(2016) R.J. ORTON et al.   REVUE SCIENTIFIQUE ET TECHNIQUE-OFFICE INTERNATIONAL DES EPIZOOTIES

In search of perfect reads

(2015) Soumitra Pal et al.   BMC BIOINFORMATICS

Enhanced virome sequencing using targeted sequence capture

(2015) Todd N. Wylie et al.   GENOME RESEARCH

JC polyomavirus mutants escape antibody-mediated neutralization

(2015) Upasana Ray et al.   Science Translational Medicine

Broadly neutralizing human monoclonal JC polyomavirus VP1–specific antibodies as candidate therapeutics for progressive multifocal leukoencephalopathy

(2015) Ivan Jelcic et al.   Science Translational Medicine

Virus hunting

(2015) W. Ian Lipkin et al.   VIROLOGY

Virome Capture Sequencing Enables Sensitive Viral Diagnosis and Comprehensive Virome Analysis

(2015) Thomas Briese et al.   mBio

Improved Detection of Emerging Drug-Resistant Mutant Cytomegalovirus Subpopulations by Deep Sequencing

(2014) Sunwen Chou et al.   ANTIMICROBIAL AGENTS AND CHEMOTHERAPY

JC Virus Quasispecies Analysis Reveals a Complex Viral Population Underlying Progressive Multifocal Leukoencephalopathy and Supports Viral Dissemination via the Hematogenous Route

(2014) Tom Van Loy et al.   JOURNAL OF VIROLOGY

Evidence linking HHV-6 with multiple sclerosis: an update

(2014) Emily C Leibovitch et al.   Current Opinion in Virology

Human cytomegalovirus intrahost evolution—a new avenue for understanding and controlling herpesvirus infections

(2014) Nicholas Renzette et al.   Current Opinion in Virology

V-Phaser 2: variant inference for viral populations

(2013) Xiao Yang et al.   BMC GENOMICS

Temporal Response of the Human Virome to Immunosuppression and Antiviral Therapy

(2013) Iwijn De Vlaminck et al.   CELL

Detection of Cytomegalovirus Drug Resistance Mutations by Next-Generation Sequencing

(2013) Malaya K. Sahoo et al.   JOURNAL OF CLINICAL MICROBIOLOGY

Quasispecies Analysis of JC Virus DNA Present in Urine of Healthy Subjects

(2013) Tom Van Loy et al.   PLoS One

Rapid Intrahost Evolution of Human Cytomegalovirus Is Shaped by Demography and Positive Selection

(2013) Nicholas Renzette et al.   PLoS Genetics

Progressive Multifocal Leukoencephalopathy: Why Gray and White Matter

(2012) Sarah Gheuens et al.   Annual Review of Pathology-Mechanisms of Disease

Sequential changes in the non-coding control region sequences of JC polyomaviruses from the cerebrospinal fluid of patients with progressive multifocal leukoencephalopathy

(2012) Kazuo Nakamichi et al.   ARCHIVES OF VIROLOGY

Molecular Biology, Epidemiology, and Pathogenesis of Progressive Multifocal Leukoencephalopathy, the JC Virus-Induced Demyelinating Disease of the Human Brain

(2012) M. W. Ferenczy et al.   CLINICAL MICROBIOLOGY REVIEWS

Prediction and prevention of the next pandemic zoonosis

(2012) Stephen S Morse et al.   LANCET

JC virus promoter/enhancers contain TATA box-associated Spi-B-binding sites that support early viral gene expression in primary astrocytes

(2011) L. J. Marshall et al.   JOURNAL OF GENERAL VIROLOGY

JC virus granule cell neuronopathy is associated with VP1 C terminus mutants

(2011) X. Dang et al.   JOURNAL OF GENERAL VIROLOGY

Sequencing and Analysis of JC Virus DNA From Natalizumab-Treated PML Patients

(2011) Carl E. Reid et al.   JOURNAL OF INFECTIOUS DISEASES

Progressive Multifocal Leukoencephalopathy (PML) Development Is Associated With Mutations in JC Virus Capsid Protein VP1 That Change Its Receptor Specificity

(2011) Leonid Gorelik et al.   JOURNAL OF INFECTIOUS DISEASES

Immunosuppression increases latent infection of brain by JC polyomavirus

(2011) Julianne Bayliss et al.   PATHOLOGY

Survey for the presence of BK, JC, KI, WU and Merkel cell polyomaviruses in human brain tissues

(2010) W.Y. Lam et al.   JOURNAL OF CLINICAL VIROLOGY

Transcription factor Spi-B binds unique sequences present in the tandem repeat promoter/enhancer of JC virus and supports viral activity

(2010) L. J. Marshall et al.   JOURNAL OF GENERAL VIROLOGY

JC Virus Latency in the Brain and Extraneural Organs of Patients with and without Progressive Multifocal Leukoencephalopathy

(2010) C. S. Tan et al.   JOURNAL OF VIROLOGY

Adaptive Mutations in the JC Virus Protein Capsid Are Associated with Progressive Multifocal Leukoencephalopathy (PML)

(2009) Shamil R. Sunyaev et al.   PLoS Genetics

Detection of JC virus DNA fragments but not proteins in normal brain tissue

(2008) Georgina Perez-Liz et al.   ANNALS OF NEUROLOGY

JC virus VP1 loop-specific polymorphisms are associated with favorable prognosis for progressive multifocal leukoencephalopathy

(2008) Serena Delbue et al.   JOURNAL OF NEUROVIROLOGY