WOX11 recruits a histone H3K27me3 demethylase to promote gene expression during shoot development in rice

Rice Homeodomain Protein WOX11 Recruits a Histone Acetyltransferase Complex to Establish Programs of Cell Proliferation of Crown Root Meristem

(2017) Shaoli Zhou et al.   PLANT CELL

The Roles of Histone Demethylase UTX and JMJD3 (KDM6B) in Cancers: Current Progress and Future Perspectives

(2016) Zhan Gang Xiao et al.   CURRENT MEDICINAL CHEMISTRY

Redox regulation in shoot growth, SAM maintenance and flowering

(2016) Jos HM Schippers et al.   CURRENT OPINION IN PLANT BIOLOGY

CLAVATA-WUSCHEL signaling in the shoot meristem

(2016) Marc Somssich et al.   DEVELOPMENT

Stem Cell Regulation by Arabidopsis WOX Genes

(2016) Alicja Dolzblasz et al.   Molecular Plant

REF6 recognizes a specific DNA sequence to demethylate H3K27me3 and regulate organ boundary formation in Arabidopsis

(2016) Xia Cui et al.   NATURE GENETICS

Concerted genomic targeting of H3K27 demethylase REF6 and chromatin-remodeling ATPase BRM in Arabidopsis

(2016) Chenlong Li et al.   NATURE GENETICS

Gene expression profiling of reproductive meristem types in early rice inflorescences by laser microdissection

(2016) Thomas W. R. Harrop et al.   PLANT JOURNAL

Pleiotropic Functions of H3K27Me3 Demethylases in Immune Cell Differentiation

(2016) Rémy Bosselut   TRENDS IN IMMUNOLOGY

Organizer-Derived WOX5 Signal Maintains Root Columella Stem Cells through Chromatin-Mediated Repression of CDF4 Expression

(2015) Limin Pi et al.   DEVELOPMENTAL CELL

The impact of Polycomb group (PcG) and Trithorax group (TrxG) epigenetic factors in plant plasticity

(2015) Maria de la Paz Sanchez et al.   NEW PHYTOLOGIST

The Interaction between Rice ERF3 and WOX11 Promotes Crown Root Development by Regulating Gene Expression Involved in Cytokinin Signaling

(2015) Yu Zhao et al.   PLANT CELL

Axillary Meristem Formation in Rice Requires theWUSCHELOrthologTILLERS ABSENT1

(2015) Wakana Tanaka et al.   PLANT CELL

Regulation of Histone Methylation and Reprogramming of Gene Expression in the Rice Inflorescence Meristem

(2015) Xiaoyun Liu et al.   PLANT CELL

Trimmomatic: a flexible trimmer for Illumina sequence data

(2014) Anthony M. Bolger et al.   BIOINFORMATICS

A Regulatory Framework for Shoot Stem Cell Control Integrating Metabolic, Transcriptional, and Phytohormone Signals

(2014) Christoph Schuster et al.   DEVELOPMENTAL CELL

The rice enhancer of zeste [E(z)] genes SDG711 and SDG718 are respectively involved in long day and short day signaling to mediate the accurate photoperiod control of flowering time

(2014) Xiaoyun Liu et al.   Frontiers in Plant Science

Identification of a Geranylgeranyl reductase gene for chlorophyll synthesis in rice

(2014) Pingyu Wang et al.   SpringerPlus

Autotoxicity mechanism of Oryza sativa: transcriptome response in rice roots exposed to ferulic acid

(2013) Wen-Chang Chi et al.   BMC GENOMICS

Rice epigenomics and epigenetics: challenges and opportunities

(2013) Xiangsong Chen et al.   CURRENT OPINION IN PLANT BIOLOGY

Genomic Distribution of Maize Facultative Heterochromatin Marked by Trimethylation of H3K27

(2013) I. Makarevitch et al.   PLANT CELL

WUSCHEL-RELATED HOMEOBOX4Is Involved in Meristem Maintenance and Is Negatively Regulated by the CLE GeneFCP1in Rice

(2013) Yoshihiro Ohmori et al.   PLANT CELL

Jumonji C Domain Protein JMJ705-Mediated Removal of Histone H3 Lysine 27 Trimethylation Is Involved in Defense-Related Gene Activation in Rice

(2013) T. Li et al.   PLANT CELL

Structural Basis of a Histone H3 Lysine 4 Demethylase Required for Stem Elongation in Rice

(2013) Qingfeng Chen et al.   PLoS Genetics

AP2/ERF Transcription Factor in Rice: Genome-Wide Canvas and Syntenic Relationships between Monocots and Eudicots

(2012) Muhammad Rashid et al.   Evolutionary Bioinformatics

Differential gene and transcript expression analysis of RNA-seq experiments with TopHat and Cufflinks

(2012) Cole Trapnell et al.   Nature Protocols

CHD3 protein recognizes and regulates methylated histone H3 lysines 4 and 27 over a subset of targets in the rice genome

(2012) Y. Hu et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Dynamics of histone H3 lysine 27 trimethylation in plant development

(2011) Binglian Zheng et al.   CURRENT OPINION IN PLANT BIOLOGY

Role of ARABIDOPSIS A-FIFTEEN in regulating leaf senescence involves response to reactive oxygen species and is dependent on ETHYLENE INSENSITIVE2

(2011) Guan-Hong Chen et al.   JOURNAL OF EXPERIMENTAL BOTANY

Arabidopsis REF6 is a histone H3 lysine 27 demethylase

(2011) Falong Lu et al.   NATURE GENETICS

WOX4Imparts Auxin Responsiveness to Cambium Cells inArabidopsis

(2011) Stefanie Suer et al.   PLANT CELL

The TOPLESS Interactome: A Framework for Gene Repression in Arabidopsis

(2011) B. Causier et al.   PLANT PHYSIOLOGY

Reversal of Histone Methylation: Biochemical and Molecular Mechanisms of Histone Demethylases

(2010) Nima Mosammaparast et al.   Annual Review of Biochemistry

TDIF Peptide Signaling Regulates Vascular Stem Cell Proliferation via the WOX4 Homeobox Gene in Arabidopsis

(2010) Y. Hirakawa et al.   PLANT CELL

WOX4 Promotes Procambial Development

(2010) J. Ji et al.   PLANT PHYSIOLOGY

Genome-Wide and Organ-Specific Landscapes of Epigenetic Modifications and Their Relationships to mRNA and Small RNA Transcriptomes in Maize

(2009) X. Wang et al.   PLANT CELL

Dynamic Landscapes of Four Histone Modifications during Deetiolation in Arabidopsis

(2009) J.-B. F. Charron et al.   PLANT CELL

The WUSCHEL-Related Homeobox Gene WOX11 Is Required to Activate Shoot-Borne Crown Root Development in Rice

(2009) Y. Zhao et al.   PLANT CELL

Circadian clock- and phytochrome-regulated Dof-like gene,Rdd1, is associated with grain size in rice

(2009) MASAO IWAMOTO et al.   PLANT CELL AND ENVIRONMENT

The Role of Casein Kinase II in Flowering Time Regulation Has Diversified during Evolution

(2009) E. Ogiso et al.   PLANT PHYSIOLOGY

Glutathione redox regulation of in vitro embryogenesis

(2009) Claudio Stasolla   PLANT PHYSIOLOGY AND BIOCHEMISTRY

The WUS homeobox-containing (WOX) protein family

(2009) Eric van der Graaff et al.   GENOME BIOLOGY

Differential Expression of WOX Genes Mediates Apical-Basal Axis Formation in the Arabidopsis Embryo

(2008) Holger Breuninger et al.   DEVELOPMENTAL CELL

Multicolor bimolecular fluorescence complementation reveals simultaneous formation of alternative CBL/CIPK complexesin planta

(2008) Rainer Waadt et al.   PLANT JOURNAL

Rice jmjC domain-containing gene JMJ706 encodes H3K9 demethylase required for floral organ development

(2008) Q. Sun et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Programming of gene expression by Polycomb group proteins

(2008) Claudia Köhler et al.   TRENDS IN CELL BIOLOGY

Model-based Analysis of ChIP-Seq (MACS)

(2008) Yong Zhang et al.   GENOME BIOLOGY