Lost in diversity: the interactions between soil-borne fungi, biodiversity and plant productivity

Shifts in rhizosphere fungal community during secondary succession following abandonment from agriculture

(2017) S Emilia Hannula et al.   ISME Journal

Below-ground complementarity effects in a grassland biodiversity experiment are related to deep-rooting species

(2017) Natalie J. Oram et al.   JOURNAL OF ECOLOGY

Differential responses of soil bacteria, fungi, archaea and protists to plant species richness and plant functional group identity

(2017) Sigrid Dassen et al.   MOLECULAR ECOLOGY

Soilborne fungi have host affinity and host-specific effects on seed germination and survival in a lowland tropical forest

(2017) Carolina Sarmiento et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Normalization and microbial differential abundance strategies depend upon data characteristics

(2017) Sophie Weiss et al.   Microbiome

FUNGuild: An open annotation tool for parsing fungal community datasets by ecological guild

(2016) Nhu H. Nguyen et al.   Fungal Ecology

Plant species richness negatively affects root decomposition in grasslands

(2016) Hongmei Chen et al.   JOURNAL OF ECOLOGY

Microbiome and Exudates of the Root and Rhizosphere of Brachypodium distachyon, a Model for Wheat

(2016) Akitomo Kawasaki et al.   PLoS One

Maintenance of Plant Species Diversity by Pathogens

(2015) James D. Bever et al.   Annual Review of Ecology Evolution and Systematics

Fitting Linear Mixed-Effects Models Usinglme4

(2015) Douglas Bates et al.   Journal of Statistical Software

Fine-scale belowground species associations in temperate grassland

(2015) Douglas A. Frank et al.   MOLECULAR ECOLOGY

Phylogenetic structure and host abundance drive disease pressure in communities

(2015) Ingrid M. Parker et al.   NATURE

Competitive avoidance not edaphic specialization drives vertical niche partitioning among sister species of ectomycorrhizal fungi

(2015) Alija B. Mujic et al.   NEW PHYTOLOGIST

Spatial heterogeneity of plant-soil feedback affects root interactions and interspecific competition

(2015) Marloes Hendriks et al.   NEW PHYTOLOGIST

Soil conditions and land use intensification effects on soil microbial communities across a range of European field sites

(2015) Bruce C. Thomson et al.   SOIL BIOLOGY & BIOCHEMISTRY

The effect of soil-borne pathogens depends on the abundance of host tree species

(2015) Yu Liu et al.   Nature Communications

Plant diversity increases soil microbial activity and soil carbon storage

(2015) Markus Lange et al.   Nature Communications

Higher plant diversity promotes higher diversity of fungal pathogens, while it decreases pathogen infection per plant

(2014) Tanja Rottstock et al.   ECOLOGY

Plant species richness promotes soil carbon and nitrogen stocks in grasslands without legumes

(2014) Wen-Feng Cong et al.   JOURNAL OF ECOLOGY

Plant diversity and overyielding: insights from belowground facilitation of intercropping in agriculture

(2014) Long Li et al.   NEW PHYTOLOGIST

Improving intercropping: a synthesis of research in agronomy, plant physiology and ecology

(2014) Rob W. Brooker et al.   NEW PHYTOLOGIST

Long-term study of root biomass in a biodiversity experiment reveals shifts in diversity effects over time

(2014) Janneke M. Ravenek et al.   OIKOS

Global diversity and geography of soil fungi

(2014) L. Tedersoo et al.   SCIENCE

Strong coupling of plant and fungal community structure across western Amazonian rainforests

(2013) Kabir G Peay et al.   ISME Journal

Independent variations of plant and soil mixtures reveal soil feedback effects on plant community overyielding

(2013) Marloes Hendriks et al.   JOURNAL OF ECOLOGY

Magnaporthiopsis, a new genus in Magnaporthaceae (Ascomycota)

(2013) Jing Luo et al.   MYCOLOGIA

Hidden Host Plant Associations of Soilborne Fungal Pathogens: An Ecological Perspective

(2013) Glenna M. Malcolm et al.   PHYTOPATHOLOGY

Root depth distribution and the diversity–productivity relationship in a long-term grassland experiment

(2012) Kevin E. Mueller et al.   ECOLOGY

Emerging fungal threats to animal, plant and ecosystem health

(2012) Matthew C. Fisher et al.   NATURE

Plant-soil feedbacks provide an additional explanation for diversity-productivity relationships

(2012) A. Kulmatiski et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Conspecific Negative Density Dependence and Forest Diversity

(2012) D. J. Johnson et al.   SCIENCE

UCHIME improves sensitivity and speed of chimera detection

(2011) Robert C. Edgar et al.   BIOINFORMATICS

Evaluating the impacts of multiple generalist fungal pathogens on temperate tree seedling survival

(2011) Michelle H. Hersh et al.   ECOLOGY

Root responses to nutrients and soil biota: drivers of species coexistence and ecosystem productivity

(2011) Hans de Kroon et al.   JOURNAL OF ECOLOGY

Spatial patterns of plant diversity below-ground as revealed by DNA barcoding

(2011) PRASAD R. KESANAKURTI et al.   MOLECULAR ECOLOGY

Search and clustering orders of magnitude faster than BLAST

(2010) Robert C. Edgar   BIOINFORMATICS

Soil microbes drive the classic plant diversity–productivity pattern

(2010) Stefan A. Schnitzer et al.   ECOLOGY

Soil fungal pathogens and the relationship between plant diversity and productivity

(2010) John L. Maron et al.   ECOLOGY LETTERS

Unveiling below-ground species abundance in a biodiversity experiment: a test of vertical niche differentiation among grassland species

(2010) Liesje Mommer et al.   JOURNAL OF ECOLOGY

Species abundance distributions and richness estimations in fungal metagenomics - lessons learned from community ecology

(2010) MARTIN UNTERSEHER et al.   MOLECULAR ECOLOGY

Vertical distribution of fungal communities in tallgrass prairie soil

(2010) Ari Jumpponen et al.   MYCOLOGIA

Negative plant–soil feedback predicts tree-species relative abundance in a tropical forest

(2010) Scott A. Mangan et al.   NATURE

Rapidly denoising pyrosequencing amplicon reads by exploiting rank-abundance distributions

(2010) Jens Reeder et al.   NATURE METHODS

QIIME allows analysis of high-throughput community sequencing data

(2010) J Gregory Caporaso et al.   NATURE METHODS

Disease in Natural Plant Populations, Communities, and Ecosystems: Insights into Ecological and Evolutionary Processes

(2010) Helen M. Alexander   PLANT DISEASE

Relative roles of niche and neutral processes in structuring a soil microbial community

(2009) Alex J Dumbrell et al.   ISME Journal

Plant-Microbe Interactions: Chemical Diversity in Plant Defense

(2009) P. Bednarek et al.   SCIENCE

JANZEN-CONNELL EFFECTS ARE WIDESPREAD AND STRONG ENOUGH TO MAINTAIN DIVERSITY IN GRASSLANDS

(2008) Jana S. Petermann et al.   ECOLOGY

Unravelling below-ground plant distributions: a real-time polymerase chain reaction method for quantifying species proportions in mixed root samples

(2008) L. MOMMER et al.   Molecular Ecology Resources

Long-term persistence of a positive plant diversity-productivity relationship in the absence of legumes

(2008) Jasper van Ruijven et al.   OIKOS