Multiplexed proteome analysis with neutron-encoded stable isotope labeling in cells and mice

Neucode Labels for Multiplexed, Absolute Protein Quantification

(2016) Gregory K. Potts et al.   ANALYTICAL CHEMISTRY

Elucidating Proteoform Families from Proteoform Intact-Mass and Lysine-Count Measurements

(2016) Michael R. Shortreed et al.   JOURNAL OF PROTEOME RESEARCH

NeuCode Proteomics Reveals Bap1 Regulation of Metabolism

(2016) Joshua M. Baughman et al.   Cell Reports

Now, More Than Ever, Proteomics Needs Better Chromatography

(2016) Evgenia Shishkova et al.   Cell Systems

Multiplexed Quantification for Data-Independent Acquisition

(2015) Catherine E. Minogue et al.   ANALYTICAL CHEMISTRY

NeuCode Labeling in Nematodes: Proteomic and Phosphoproteomic Impact of Ascaroside Treatment in Caenorhabditis elegans

(2015) Timothy W. Rhoads et al.   MOLECULAR & CELLULAR PROTEOMICS

One-hour proteome analysis in yeast

(2015) Alicia L Richards et al.   Nature Protocols

Neutron-Encoded Mass Signatures for Quantitative Top-Down Proteomics

(2014) Timothy W. Rhoads et al.   ANALYTICAL CHEMISTRY

Ion Coalescence of Neutron Encoded TMT 10-Plex Reporter Ions

(2014) Thilo Werner et al.   ANALYTICAL CHEMISTRY

NeuCode Labels for Relative Protein Quantification

(2014) Anna E. Merrill et al.   MOLECULAR & CELLULAR PROTEOMICS

Accurate Proteome-wide Label-free Quantification by Delayed Normalization and Maximal Peptide Ratio Extraction, Termed MaxLFQ

(2014) Jürgen Cox et al.   MOLECULAR & CELLULAR PROTEOMICS

Neutron-encoded mass signatures for multiplexed proteome quantification

(2013) Alexander S Hebert et al.   NATURE METHODS

Orbitrap mass spectrometry with resolving powers above 1,000,000

(2012) Eduard Denisov et al.   INTERNATIONAL JOURNAL OF MASS SPECTROMETRY

The use of mass defect in modern mass spectrometry

(2012) Lekha Sleno   JOURNAL OF MASS SPECTROMETRY

Observation of ion coalescence in Orbitrap Fourier transform mass spectrometry

(2012) Mikhail V. Gorshkov et al.   RAPID COMMUNICATIONS IN MASS SPECTROMETRY

Use of stable isotope labeling by amino acids in cell culture as a spike-in standard in quantitative proteomics

(2011) Tamar Geiger et al.   Nature Protocols

Extending SILAC to Proteomics of Plant Cell Lines

(2011) Wolfgang Schütz et al.   PLANT CELL

Multiplex peptide stable isotope dimethyl labeling for quantitative proteomics

(2009) Paul J Boersema et al.   Nature Protocols

A practical guide to the MaxQuant computational platform for SILAC-based quantitative proteomics

(2009) Jürgen Cox et al.   Nature Protocols

SILAC Mouse for Quantitative Proteomics Uncovers Kindlin-3 as an Essential Factor for Red Blood Cell Function

(2008) Marcus Krüger et al.   CELL

MaxQuant enables high peptide identification rates, individualized p.p.b.-range mass accuracies and proteome-wide protein quantification

(2008) Jürgen Cox et al.   NATURE BIOTECHNOLOGY

Quantitative proteomics using stable isotope labeling with amino acids in cell culture

(2008) H C Harsha et al.   Nature Protocols