The Standard Genetic Code Facilitates Exploration of the Space of Functional Nucleotide Sequences

The lack of foundation in the mechanism on which are based the physico-chemical theories for the origin of the genetic code is counterposed to the credible and natural mechanism suggested by the coevolution theory

(2016) Massimo Di Giulio   JOURNAL OF THEORETICAL BIOLOGY

Pervasive degeneracy and epistasis in a protein-protein interface

(2015) A. I. Podgornaia et al.   SCIENCE

A Comprehensive, High-Resolution Map of a Gene’s Fitness Landscape

(2014) Elad Firnberg et al.   MOLECULAR BIOLOGY AND EVOLUTION

Deep mutational scanning: a new style of protein science

(2014) Douglas M Fowler et al.   NATURE METHODS

Evolution of the Genetic Code by Incorporation of Amino Acids that Improved or Changed Protein Function

(2013) Brian R. Francis   JOURNAL OF MOLECULAR EVOLUTION

Prevalence of Multinucleotide Replacements in Evolution of Primates and Drosophila

(2013) Nadezhda V. Terekhanova et al.   MOLECULAR BIOLOGY AND EVOLUTION

The genetic code constrains yet facilitates Darwinian evolution

(2013) Elad Firnberg et al.   NUCLEIC ACIDS RESEARCH

Proteome-wide analysis reveals clues of complementary interactions between mRNAs and their cognate proteins as the physicochemical foundation of the genetic code

(2013) Anton A Polyansky et al.   RNA Biology

Imprints of the genetic code in the ribosome

(2010) D. B. F. Johnson et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

A four-column theory for the origin of the genetic code: tracing the evolutionary pathways that gave rise to an optimized code

(2009) Paul G Higgs   Biology Direct

RNA–Amino Acid Binding: A Stereochemical Era for the Genetic Code

(2009) Michael Yarus et al.   JOURNAL OF MOLECULAR EVOLUTION

Extreme genetic code optimality from a molecular dynamics calculation of amino acid polar requirement

(2009) Thomas Butler et al.   PHYSICAL REVIEW E

A Neutral Origin for Error Minimization in the Genetic Code

(2008) Steven E. Massey   JOURNAL OF MOLECULAR EVOLUTION

Fast unfolding of communities in large networks

(2008) Vincent D Blondel et al.   JOURNAL OF STATISTICAL MECHANICS-THEORY AND EXPERIMENT