Multiple Pleistocene refugia and repeated phylogeographic breaks in the southern Caspian Sea region: Insights from the freshwater crab Potamon ibericum

Life history traits and patterns of sexual dimorphism in the freshwater crab Potamon ibericum (Bieberstein, 1809) (Decapoda: Brachyura: Potamidae) from the western Alborz Mountains, Iran

(2017) Elaheh Parvizi et al.   JOURNAL OF CRUSTACEAN BIOLOGY

Mitochondrial DNA analysis of Iranian brown bears ( Ursus arctos ) reveals new phylogeographic lineage

(2016) Mohammad Reza Ashrafzadeh et al.   MAMMALIAN BIOLOGY

Evolutionary melting pots: a biodiversity hotspot shaped by ring diversifications around the Black Sea in the Eastern tree frog (Hyla orientalis )

(2016) Christophe Dufresnes et al.   MOLECULAR ECOLOGY

Transverse Alpine Speciation Driven by Glaciation

(2016) Graham P. Wallis et al.   TRENDS IN ECOLOGY & EVOLUTION

Global cooling as a driver of diversification in a major marine clade

(2016) Katie E. Davis et al.   Nature Communications

Drastic underestimation of amphipod biodiversity in the endangered Irano-Anatolian and Caucasus biodiversity hotspots

(2016) Ahmad-Reza Katouzian et al.   Scientific Reports

tcsBU: a tool to extend TCS network layout and visualization

(2015) António Múrias dos Santos et al.   BIOINFORMATICS

Problems and Cautions With Sequence Mismatch Analysis and Bayesian Skyline Plots to Infer Historical Demography

(2015) William Stewart Grant   JOURNAL OF HEREDITY

Phylogeography of the Chinese endemic freshwater crabSinopotamon acutum(Brachyura, Potamidae)

(2015) Fang Fang et al.   ZOOLOGICA SCRIPTA

Current status and palaeostages of the Caspian Sea as a potential evaluation tool for climate model simulations

(2014) A.V. Kislov et al.   QUATERNARY INTERNATIONAL

BEAST 2: A Software Platform for Bayesian Evolutionary Analysis

(2014) Remco Bouckaert et al.   PLoS Computational Biology

Molecular diversity of freshwater crabs from Sulawesi and the sequential colonization of ancient lakes

(2013) Theodor Poettinger et al.   HYDROBIOLOGIA

Identification of a cryptic lineage within Potamon fluviatile (Herbst) (Crustacea�:�Brachyura�:�Potamidae)

(2013) Ruth Jesse et al.   INVERTEBRATE SYSTEMATICS

Mitochondrial evidence uncovers a refugium for the fat dormouse (Glis glis Linnaeus, 1766) in Hyrcanian forests of northern Iran

(2013) Gholamreza Naderi et al.   MAMMALIAN BIOLOGY

MEGA6: Molecular Evolutionary Genetics Analysis Version 6.0

(2013) Koichiro Tamura et al.   MOLECULAR BIOLOGY AND EVOLUTION

The Confounding Effect of Population Structure on Bayesian Skyline Plot Inferences of Demographic History

(2013) Rasmus Heller et al.   PLoS One

Cryptic Speciation Patterns in Iranian Rock Lizards Uncovered by Integrative Taxonomy

(2013) Faraham Ahmadzadeh et al.   PLoS One

Holocene vegetation history and sea level changes in the SE corner of the Caspian Sea: relevance to SW Asia climate

(2013) Suzanne A.G. Leroy et al.   QUATERNARY SCIENCE REVIEWS

Local Adaptation along Smooth Ecological Gradients Causes Phylogeographic Breaks and Phenotypic Clustering

(2012) Darren E. Irwin   AMERICAN NATURALIST

Ring distributions leading to species formation: a global topographic analysis of geographic barriers associated with ring species

(2012) William B Monahan et al.   BMC BIOLOGY

jModelTest 2: more models, new heuristics and parallel computing

(2012) Diego Darriba et al.   NATURE METHODS

MrBayes 3.2: Efficient Bayesian Phylogenetic Inference and Model Choice Across a Large Model Space

(2012) Fredrik Ronquist et al.   SYSTEMATIC BIOLOGY

Founder takes all: density-dependent processes structure biodiversity

(2012) Jonathan M. Waters et al.   TRENDS IN ECOLOGY & EVOLUTION

Palaeoclimatic models help to understand current distribution of Caucasian forest species

(2011) DAVID TARKHNISHVILI et al.   BIOLOGICAL JOURNAL OF THE LINNEAN SOCIETY

Rethinking species' ability to cope with rapid climate change

(2011) CHRISTIAN HOF et al.   GLOBAL CHANGE BIOLOGY

Competitive exclusion: phylogeography’s ‘elephant in the room’?

(2011) JONATHAN M. WATERS   MOLECULAR ECOLOGY

Evolution of freshwater crab diversity in the Aegean region (Crustacea: Brachyura: Potamidae)

(2011) Ruth Jesse et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

raxmlGUI: a graphical front-end for RAxML

(2011) Daniele Silvestro et al.   ORGANISMS DIVERSITY & EVOLUTION

Correlation of upper quaternary deposits and paleogeography of the Black and Caspian seas

(2011) V. M. Sorokin   STRATIGRAPHY AND GEOLOGICAL CORRELATION

Locomotor Activity in the Freshwater Crab Potamon fluviatile: The Analysis of Temporal Patterns by Radio-telemetry

(2010) Francesca Gherardi et al.   ETHOLOGY

MorphoJ: an integrated software package for geometric morphometrics

(2010) CHRISTIAN PETER KLINGENBERG   Molecular Ecology Resources

Arlequin suite ver 3.5: a new series of programs to perform population genetics analyses under Linux and Windows

(2010) LAURENT EXCOFFIER et al.   Molecular Ecology Resources

Recent vicariant and dispersal events affecting the phylogeny and biogeography of East Asian freshwater crab genus Nanhaipotamon (Decapoda: Potamidae)

(2010) Hsi-Te Shih et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

DnaSP v5: a software for comprehensive analysis of DNA polymorphism data

(2009) P. Librado et al.   BIOINFORMATICS

Linking genotypes to phenotypes and fitness: how mechanistic biology can inform molecular ecology

(2009) ANNE C. DALZIEL et al.   MOLECULAR ECOLOGY

Refugia revisited: individualistic responses of species in space and time

(2009) J. R. Stewart et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Bayesian inference of population size history from multiple loci

(2008) Joseph Heled et al.   BMC EVOLUTIONARY BIOLOGY

Modeling of species distributions with Maxent: new extensions and a comprehensive evaluation

(2008) Steven J. Phillips et al.   ECOGRAPHY

Phylogeography: retrospect and prospect

(2008) John C. Avise   JOURNAL OF BIOGEOGRAPHY

Modern pollen rain–vegetation relationships along a forest–steppe transect in the Golestan National Park, NE Iran

(2008) M. Djamali et al.   REVIEW OF PALAEOBOTANY AND PALYNOLOGY

Phylogeographic insights into cryptic glacial refugia

(2008) J PROVAN et al.   TRENDS IN ECOLOGY & EVOLUTION