Selection of hyperproduction of AmpC and SME-1 in a carbapenem-resistant Serratia marcescens isolate during antibiotic therapy

Investigation of a suspected nosocomial transmission of blaKPC3-mediated carbapenem-resistant Klebsiella pneumoniae by whole genome sequencing

(2016) Shangxin Yang et al.   DIAGNOSTIC MICROBIOLOGY AND INFECTIOUS DISEASE

Improvements to PATRIC, the all-bacterial Bioinformatics Database and Analysis Resource Center

(2016) Alice R. Wattam et al.   NUCLEIC ACIDS RESEARCH

The Galaxy platform for accessible, reproducible and collaborative biomedical analyses: 2016 update

(2016) Enis Afgan et al.   NUCLEIC ACIDS RESEARCH

Carbapenemase-Producing Enterobacteriaceae

(2015) David Paterson et al.   SEMINARS IN RESPIRATORY AND CRITICAL CARE MEDICINE

IS5Element Integration, a Novel Mechanism for RapidIn VivoEmergence of Tigecycline Nonsusceptibility in Klebsiella pneumoniae

(2014) Lindsey E. Nielsen et al.   ANTIMICROBIAL AGENTS AND CHEMOTHERAPY

Genome Evolution and Plasticity of Serratia marcescens, an Important Multidrug-Resistant Nosocomial Pathogen

(2014) Atsushi Iguchi et al.   Genome Biology and Evolution

Serratia marcescens harbouring SME-type class A carbapenemases in Canada and the presence of blaSME on a novel genomic island, SmarGI1-1

(2014) L. F. Mataseje et al.   JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY

Solving the Problem of Comparing Whole Bacterial Genomes across Different Sequencing Platforms

(2014) Rolf S. Kaas et al.   PLoS One

Microbial Persistence and the Road to Drug Resistance

(2013) Nadia R. Cohen et al.   Cell Host & Microbe

The Use of Cefepime for Treating AmpC β-Lactamase–Producing Enterobacteriaceae

(2013) Pranita D. Tamma et al.   CLINICAL INFECTIOUS DISEASES

Antibiotics and antibiotic resistance: A bitter fight against evolution

(2013) Alexandro Rodríguez-Rojas et al.   INTERNATIONAL JOURNAL OF MEDICAL MICROBIOLOGY

The SEED and the Rapid Annotation of microbial genomes using Subsystems Technology (RAST)

(2013) Ross Overbeek et al.   NUCLEIC ACIDS RESEARCH

PATRIC, the bacterial bioinformatics database and analysis resource

(2013) Alice R. Wattam et al.   NUCLEIC ACIDS RESEARCH

Beta-lactamase induction and cell wall metabolism in Gram-negative bacteria

(2013) Ximin Zeng et al.   Frontiers in Microbiology

The β-lactamase inhibitor avibactam (NXL104) does not induce ampC β -lactamase in Enterobacter cloacae

(2013) Christine Miossec et al.   Infection and Drug Resistance

VarB: a variation browsing and analysis tool for variants derived from next-generation sequencing data

(2012) M. D. Preston et al.   BIOINFORMATICS

Detection systems for carbapenemase gene identification should include the SME serine carbapenemase

(2012) Karen Bush et al.   INTERNATIONAL JOURNAL OF ANTIMICROBIAL AGENTS

An Integrated Pipeline for de Novo Assembly of Microbial Genomes

(2012) Andrew Tritt et al.   PLoS One

Mutation in thesdeSGene Promotes Expression of thesdeABEfflux Pump Genes and Multidrug Resistance in Serratia marcescens

(2011) Hideaki Maseda et al.   ANTIMICROBIAL AGENTS AND CHEMOTHERAPY

The evolution of drug resistance and the curious orthodoxy of aggressive chemotherapy

(2011) A. F. Read et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Manipulation of FASTQ data with Galaxy

(2010) D. Blankenberg et al.   BIOINFORMATICS

progressiveMauve: Multiple Genome Alignment with Gene Gain, Loss and Rearrangement

(2010) Aaron E. Darling et al.   PLoS One

AmpC  -Lactamases

(2009) G. A. Jacoby   CLINICAL MICROBIOLOGY REVIEWS