Recombination of plasmids in a carbapenem-resistant NDM-5-producing clinical Escherichia coli isolate

Widespread Dissemination of Carbapenem-Resistant Escherichia coli Sequence Type 167 Strains HarboringblaNDM-5in Clinical Settings in China

(2016) Yonglu Huang et al.   ANTIMICROBIAL AGENTS AND CHEMOTHERAPY

Tracking inter-institutional spread of NDM and identification of a novel NDM-positive plasmid, pSg1-NDM, using next-generation sequencing approaches

(2016) Wei Xin Khong et al.   JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY

Plasmid Dynamics in KPC-Positive Klebsiella pneumoniae during Long-Term Patient Colonization

(2016) Sean Conlan et al.   mBio

Molecular Survey of the Dissemination of TwoblaKPC-Harboring IncFIA Plasmids in New Jersey and New York Hospitals

(2014) Liang Chen et al.   ANTIMICROBIAL AGENTS AND CHEMOTHERAPY

Single-molecule sequencing to track plasmid diversity of hospital-associated carbapenemase-producing Enterobacteriaceae

(2014) S. Conlan et al.   Science Translational Medicine

A Cointegrate-Like Plasmid That Facilitates Dissemination by Conjugation of the Extended-Spectrum β-Lactamase CTX-M-17

(2013) David L. Lin et al.   ANTIMICROBIAL AGENTS AND CHEMOTHERAPY

The SEED and the Rapid Annotation of microbial genomes using Subsystems Technology (RAST)

(2013) Ross Overbeek et al.   NUCLEIC ACIDS RESEARCH

SPAdes: A New Genome Assembly Algorithm and Its Applications to Single-Cell Sequencing

(2012) Anton Bankevich et al.   JOURNAL OF COMPUTATIONAL BIOLOGY

Easyfig: a genome comparison visualizer

(2011) M. J. Sullivan et al.   BIOINFORMATICS

BLAST Ring Image Generator (BRIG): simple prokaryote genome comparisons

(2011) Nabil-Fareed Alikhan et al.   BMC GENOMICS