Identification of altered metabolic pathways of γ-irradiated rice mutant via network-based transcriptome analysis

Genome-wide DNA polymorphism and transcriptome analysis of an early-maturing rice mutant

(2014) Sun-Goo Hwang et al.   GENETICA

Genome-wide transcriptome profiling of ROS scavenging and signal transduction pathways in rice (Oryza sativa L.) in response to different types of ionizing radiation

(2012) Sun-Hee Kim et al.   MOLECULAR BIOLOGY REPORTS

Identification of mutations in OASA1 gene from a gamma-irradiated rice mutant population

(2012) Jae Buhm Chun et al.   PLANT BREEDING

Antioxidant response of Arabidopsis plants to gamma irradiation: Genome-wide expression profiling of the ROS scavenging and signal transduction pathways

(2011) Dong Sub Kim et al.   JOURNAL OF PLANT PHYSIOLOGY

Comparative Network Analysis Reveals That Tissue Specificity and Gene Function Are Important Factors Influencing the Mode of Expression Evolution in Arabidopsis and Rice

(2011) S. Movahedi et al.   PLANT PHYSIOLOGY

Gene Coexpression Network Alignment and Conservation of Gene Modules between Two Grass Species: Maize and Rice

(2011) S. P. Ficklin et al.   PLANT PHYSIOLOGY

Genetic diversity and striatal gene networks: focus on the heterogeneous stock-collaborative cross (HS-CC) mouse

(2010) Ovidiu D Iancu et al.   BMC GENOMICS

Coexpression Network Analysis Identifies Transcriptional Modules Related to Proastrocytic Differentiation and Sprouty Signaling in Glioma

(2010) A. E. Ivliev et al.   CANCER RESEARCH

Detecting network modules in fMRI time series: A weighted network analysis approach

(2010) Jeanette A. Mumford et al.   NEUROIMAGE

The Association of Multiple Interacting Genes with Specific Phenotypes in Rice Using Gene Coexpression Networks

(2010) Stephen P. Ficklin et al.   PLANT PHYSIOLOGY

Identifying Modules of Coexpressed Transcript Units and Their Organization of Saccharopolyspora erythraea from Time Series Gene Expression Profiles

(2010) Xiao Chang et al.   PLoS One

Aspartic proteases gene family in rice: Gene structure and expression, predicted protein features and phylogenetic relation

(2009) Jiongjiong Chen et al.   GENE

Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources

(2009) Da Wei Huang et al.   Nature Protocols

TILLING in Lotus japonicus Identified Large Allelic Series for Symbiosis Genes and Revealed a Bias in Functionally Defective Ethyl Methanesulfonate Alleles toward Glycine Replacements

(2009) J. Perry et al.   PLANT PHYSIOLOGY

WGCNA: an R package for weighted correlation network analysis

(2008) Peter Langfelder et al.   BMC BIOINFORMATICS

Boolean Network Model Predicts Cell Cycle Sequence of Fission Yeast

(2008) Maria I. Davidich et al.   PLoS One

A triallelic system of S5 is a major regulator of the reproductive barrier and compatibility of indica-japonica hybrids in rice

(2008) J. Chen et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA