4.7 Article

Deep Learning Algorithm for Auto-Delineation of High-Risk Oropharyngeal Clinical Target Volumes With Built-In Dice Similarity Coefficient Parameter Optimization Function

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Publisher

ELSEVIER SCIENCE INC
DOI: 10.1016/j.ijrobp.2018.01.114

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Funding

  1. Andrew Sabin Family Foundation
  2. National Institutes of Health (NIH)
  3. National Institute for Dental and Craniofacial Research Award [1R01DE025248-01/R56DE025248-01]
  4. National Science Foundation (NSF), Division of Mathematical Sciences, Joint NIH/NSF Initiative on Quantitative Approaches to Biomedical Big Data [1R01CA225190-01]
  5. National Science Foundation (NSF), Division of Mathematical Sciences, Joint NIH/NSF Initiative on Quantitative Approaches to Biomedical Big Data (NSF) [1557679]
  6. NIH Big Data to Knowledge Program of the National Cancer Institute (NCI) Early Stage Development of Technologies in Biomedical Computing, Informatics, and Big Data Science Award [1R01CA214825-01]
  7. NCI Early Phase Clinical Trials and Imaging and Image-Guided Interventions Program [1R01CA218148-01]
  8. NIH/NCI Cancer Center Support Grant (CCSG) Pilot Research Program Award from the University of Texas MD Anderson CCSG Radiation Oncology and Cancer Imaging Program [P30CA016672]
  9. NIH/NCI Head and Neck Specialized Programs of Research Excellence Developmental Research Program Award [P50 CA097007-10]
  10. Elekta AB
  11. Egyptian Ministry of Higher Education
  12. Division Of Mathematical Sciences
  13. Direct For Mathematical & Physical Scien [1557679] Funding Source: National Science Foundation

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Purpose: Automating and standardizing the contouring of clinical target volumes (CTVs) can reduce interphysician variability, which is one of the largest sources of uncertainty in head and neck radiation therapy. In addition to using uniform margin expansions to auto-delineate high-risk CTVs, very little work has been performed to provide patient-and disease-specific high-risk CTVs. The aim of the present study was to develop a deep neural network for the auto-delineation of high-risk CTVs. Methods and Materials: Fifty-two oropharyngeal cancer patients were selected for the present study. All patients were treated at The University of Texas MD Anderson Cancer Center from January 2006 to August 2010 and had previously contoured gross tumor volumes and CTVs. We developed a deep learning algorithm using deep auto-encoders to identify physician contouring patterns at our institution. These models use distance map information from surrounding anatomic structures and the gross tumor volume as input parameters and conduct voxel-based classification to identify voxels that are part of the high-risk CTV. In addition, we developed a novel probability threshold selection function, based on the Dice similarity coefficient (DSC), to improve the generalization of the predicted volumes. The DSC-based function is implemented during an inner cross-validation loop, and probability thresholds are selected a priori during model parameter optimization. We performed a volumetric comparison between the predicted and manually contoured volumes to assess our model. Results: The predicted volumes had a median DSC value of 0.81 (range 0.62-0.90), median mean surface distance of 2.8 mm (range 1.6-5.5), and median 95th Hausdorff distance of 7.5 mm (range 4.7-17.9) when comparing our predicted high-risk CTVs with the physician manual contours. Conclusions: These predicted high-risk CTVs provided close agreement to the ground-truth compared with current interobserver variability. The predicted contours could be implemented clinically, with only minor or no changes. (C) 2018 Elsevier Inc. All rights reserved.

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