Interactions among plants, bacteria, and fungi reduce extracellular enzyme activities under long-term N fertilization

Isolation and characterization ofRhizobiumsp. strain YS-1r that degrades lignin in plant biomass

(2017) C.A. Jackson et al.   JOURNAL OF APPLIED MICROBIOLOGY

Soluble soil aluminum alters the relative uptake of mineral nitrogen forms by six mature temperate broadleaf tree species: possible implications for watershed nitrate retention

(2017) Mark B. Burnham et al.   OECOLOGIA

Enzymatic Degradation of Lignin in Soil: A Review

(2017) Rahul Datta et al.   Sustainability

Normalization and microbial differential abundance strategies depend upon data characteristics

(2017) Sophie Weiss et al.   Microbiome

Chronic nitrogen additions fundamentally restructure the soil fungal community in a temperate forest

(2016) Eric W. Morrison et al.   Fungal Ecology

Bacterial enzymes involved in lignin degradation

(2016) Gonzalo de Gonzalo et al.   JOURNAL OF BIOTECHNOLOGY

Dominant mycorrhizal association of trees alters carbon and nutrient cycling by selecting for microbial groups with distinct enzyme function

(2016) Tanya E. Cheeke et al.   NEW PHYTOLOGIST

Mycorrhizal association as a primary control of the CO2 fertilization effect

(2016) C. Terrer et al.   SCIENCE

Twenty-five-year response of the herbaceous layer of a temperate hardwood forest to elevated nitrogen deposition

(2016) Frank S. Gilliam et al.   Ecosphere

Anthropogenic N Deposition Slows Decay by Favoring Bacterial Metabolism: Insights from Metagenomic Analyses

(2016) Zachary B. Freedman et al.   Frontiers in Microbiology

Driving forces of soil bacterial community structure, diversity, and function in temperate grasslands and forests

(2016) Kristin Kaiser et al.   Scientific Reports

Soil Nitrogen Availability Affects Belowground Carbon Allocation and Soil Respiration in Northern Hardwood Forests of New Hampshire

(2015) Kikang Bae et al.   ECOSYSTEMS

Rhizosphere processes are quantitatively important components of terrestrial carbon and nutrient cycles

(2015) Adrien C. Finzi et al.   GLOBAL CHANGE BIOLOGY

Mycorrhizal type determines the magnitude and direction of root-induced changes in decomposition in a temperate forest

(2015) Edward R. Brzostek et al.   NEW PHYTOLOGIST

Differential responses of total and active soil microbial communities to long-term experimental N deposition

(2015) Zachary B. Freedman et al.   SOIL BIOLOGY & BIOCHEMISTRY

Chronic nitrogen additions suppress decomposition and sequester soil carbon in temperate forests

(2014) S. D. Frey et al.   BIOGEOCHEMISTRY

Exploring the transfer of recent plant photosynthates to soil microbes: mycorrhizal pathway vs direct root exudation

(2014) Christina Kaiser et al.   NEW PHYTOLOGIST

Root-induced changes in nutrient cycling in forests depend on exudation rates

(2014) Huajun Yin et al.   SOIL BIOLOGY & BIOCHEMISTRY

Patterns in root traits of woody species hosting arbuscular and ectomycorrhizas: implications for the evolution of belowground strategies

(2014) Louise H. Comas et al.   Ecology and Evolution

Mycorrhizal associations of dominant trees influence nitrate leaching responses to N deposition

(2013) Meghan G. Midgley et al.   BIOGEOCHEMISTRY

Enhanced root exudation stimulates soil nitrogen transformations in a subalpine coniferous forest under experimental warming

(2013) Huajun Yin et al.   GLOBAL CHANGE BIOLOGY

Towards a unified paradigm for sequence-based identification of fungi

(2013) Urmas Kõljalg et al.   MOLECULAR ECOLOGY

Seasonal dynamics of fungal communities in a temperate oak forest soil

(2013) Jana Voříšková et al.   NEW PHYTOLOGIST

Synthesis and modeling perspectives of rhizosphere priming

(2013) Weixin Cheng et al.   NEW PHYTOLOGIST

The mycorrhizal-associated nutrient economy: a new framework for predicting carbon-nutrient couplings in temperate forests

(2013) Richard P. Phillips et al.   NEW PHYTOLOGIST

Root carbon inputs to the rhizosphere stimulate extracellular enzyme activity and increase nitrogen availability in temperate forest soils

(2012) Edward R. Brzostek et al.   BIOGEOCHEMISTRY

Evaluation of general 16S ribosomal RNA gene PCR primers for classical and next-generation sequencing-based diversity studies

(2012) Anna Klindworth et al.   NUCLEIC ACIDS RESEARCH

High-Coverage ITS Primers for the DNA-Based Identification of Ascomycetes and Basidiomycetes in Environmental Samples

(2012) Hirokazu Toju et al.   PLoS One

Cross-biome metagenomic analyses of soil microbial communities and their functional attributes

(2012) N. Fierer et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Growth of saprotrophic fungi and bacteria in soil

(2011) Johannes Rousk et al.   FEMS MICROBIOLOGY ECOLOGY

Comparative metagenomic, phylogenetic and physiological analyses of soil microbial communities across nitrogen gradients

(2011) Noah Fierer et al.   ISME Journal

Simulated Atmospheric N Deposition Alters Fungal Community Composition and Suppresses Ligninolytic Gene Expression in a Northern Hardwood Forest

(2011) Ivan P. Edwards et al.   PLoS One

Search and clustering orders of magnitude faster than BLAST

(2010) Robert C. Edgar   BIOINFORMATICS

Substrate supply, fine roots, and temperature control proteolytic enzyme activity in temperate forest soils

(2010) Edward R. Brzostek et al.   ECOLOGY

Reduction of forest soil respiration in response to nitrogen deposition

(2010) I. A. Janssens et al.   Nature Geoscience

Soil-carbon response to warming dependent on microbial physiology

(2010) Steven D. Allison et al.   Nature Geoscience

QIIME allows analysis of high-throughput community sequencing data

(2010) J Gregory Caporaso et al.   NATURE METHODS

The effects of substrate composition, quantity, and diversity on microbial activity

(2010) Daniel L. Hernández et al.   PLANT AND SOIL

Pyrosequencing-Based Assessment of Soil pH as a Predictor of Soil Bacterial Community Structure at the Continental Scale

(2009) C. L. Lauber et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

SIMULATED ATMOSPHERIC NO3−DEPOSITION INCREASES SOIL ORGANIC MATTER BY SLOWING DECOMPOSITION

(2009) Donald R. Zak et al.   ECOLOGICAL APPLICATIONS

Increased tree carbon storage in response to nitrogen deposition in the US

(2009) R. Quinn Thomas et al.   Nature Geoscience

Phenol oxidase, peroxidase and organic matter dynamics of soil

(2009) Robert L. Sinsabaugh   SOIL BIOLOGY & BIOCHEMISTRY

Nitrogen additions and microbial biomass: a meta-analysis of ecosystem studies

(2008) Kathleen K. Treseder   ECOLOGY LETTERS

Stoichiometry of soil enzyme activity at global scale

(2008) Robert L. Sinsabaugh et al.   ECOLOGY LETTERS

Are Basidiomycete Laccase Gene Abundance and Composition Related to Reduced Lignolytic Activity Under Elevated Atmospheric NO3 − Deposition in a Northern Hardwood Forest?

(2008) John E. Hassett et al.   MICROBIAL ECOLOGY

Global nitrogen deposition and carbon sinks

(2008) Dave S. Reay et al.   Nature Geoscience