Structural and molecular dynamics studies of a C1-oxidizing lytic polysaccharide monooxygenase from Heterobasidion irregulare reveal amino acids important for substrate recognition
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Title
Structural and molecular dynamics studies of a C1-oxidizing lytic polysaccharide monooxygenase from Heterobasidion irregulare
reveal amino acids important for substrate recognition
Authors
Keywords
-
Journal
FEBS Journal
Volume 285, Issue 12, Pages 2225-2242
Publisher
Wiley
Online
2018-04-17
DOI
10.1111/febs.14472
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Related references
Note: Only part of the references are listed.- Oxidative cleavage of polysaccharides by monocopper enzymes depends on H2O2
- (2017) Bastien Bissaro et al. Nature Chemical Biology
- Structural and electronic determinants of lytic polysaccharide monooxygenase reactivity on polysaccharide substrates
- (2017) T. J. Simmons et al. Nature Communications
- Lytic polysaccharide monooxygenases disrupt the cellulose fibers structure
- (2017) Ana Villares et al. Scientific Reports
- Distribution and diversity of enzymes for polysaccharide degradation in fungi
- (2017) Renaud Berlemont Scientific Reports
- A quantitative indicator diagram for lytic polysaccharide monooxygenases reveals the role of aromatic surface residues in HjLPMO9A regioselectivity
- (2017) Barbara Danneels et al. PLoS One
- Oxygen Activation at the Active Site of a Fungal Lytic Polysaccharide Monooxygenase
- (2016) William B. O'Dell et al. ANGEWANDTE CHEMIE-INTERNATIONAL EDITION
- Lytic polysaccharide monooxygenases from Myceliophthora thermophila C1 differ in substrate preference and reducing agent specificity
- (2016) Matthias Frommhagen et al. Biotechnology for Biofuels
- On the catalytic mechanisms of lytic polysaccharide monooxygenases
- (2016) Paul H Walton et al. CURRENT OPINION IN CHEMICAL BIOLOGY
- Fg LPMO9A from Fusarium graminearum cleaves xyloglucan independently of the backbone substitution pattern
- (2016) Laura Nekiunaite et al. FEBS LETTERS
- Simultaneous analysis of C1 and C4 oxidized oligosaccharides, the products of lytic polysaccharide monooxygenases acting on cellulose
- (2016) Bjørge Westereng et al. JOURNAL OF CHROMATOGRAPHY A
- The molecular basis of polysaccharide cleavage by lytic polysaccharide monooxygenases
- (2016) Kristian E H Frandsen et al. Nature Chemical Biology
- Interactions of a fungal lytic polysaccharide monooxygenase with β-glucan substrates and cellobiose dehydrogenase
- (2016) Gaston Courtade et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Extracellular electron transfer systems fuel cellulose oxidative degradation
- (2016) D. Kracher et al. SCIENCE
- Lytic Polysaccharide Monooxygenases: The Microbial Power Tool for Lignocellulose Degradation
- (2016) Katja Salomon Johansen TRENDS IN PLANT SCIENCE
- Lytic polysaccharide monooxygenases: a crystallographer's view on a new class of biomass-degrading enzymes
- (2016) Kristian E. H. Frandsen et al. IUCrJ
- Cellulose Degradation by Polysaccharide Monooxygenases
- (2015) William T. Beeson et al. Annual Review of Biochemistry
- Substrate specificity and regioselectivity of fungal AA9 lytic polysaccharide monooxygenases secreted by Podospora anserina
- (2015) Chloé Bennati-Granier et al. Biotechnology for Biofuels
- Classification of fungal and bacterial lytic polysaccharide monooxygenases
- (2015) Peter K Busk et al. BMC GENOMICS
- Fungal Cellulases
- (2015) Christina M. Payne et al. CHEMICAL REVIEWS
- Structural and Functional Characterization of a Lytic Polysaccharide Monooxygenase with Broad Substrate Specificity
- (2015) Anna S. Borisova et al. JOURNAL OF BIOLOGICAL CHEMISTRY
- Lytic Polysaccharide Monooxygenases in Biomass Conversion
- (2015) Glyn R. Hemsworth et al. TRENDS IN BIOTECHNOLOGY
- Structure and boosting activity of a starch-degrading lytic polysaccharide monooxygenase
- (2015) Leila Lo Leggio et al. Nature Communications
- Structural basis for cellobiose dehydrogenase action during oxidative cellulose degradation
- (2015) Tien-Chye Tan et al. Nature Communications
- Evolution of substrate specificity in bacterial AA10 lytic polysaccharide monooxygenases
- (2014) Adam J Book et al. Biotechnology for Biofuels
- Fungal cellulose degradation by oxidative enzymes: from dysfunctional GH61 family to powerful lytic polysaccharide monooxygenase family
- (2014) I. Morgenstern et al. Briefings in Functional Genomics
- Cellulose Surface Degradation by a Lytic Polysaccharide Monooxygenase and Its Effect on Cellulase Hydrolytic Efficiency
- (2014) Manuel Eibinger et al. JOURNAL OF BIOLOGICAL CHEMISTRY
- Deciphering key features in protein structures with the new ENDscript server
- (2014) Xavier Robert et al. NUCLEIC ACIDS RESEARCH
- Discovery of LPMO activity on hemicelluloses shows the importance of oxidative processes in plant cell wall degradation
- (2014) J. W. Agger et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Using a model filamentous fungus to unravel mechanisms of lignocellulose deconstruction
- (2013) Elizabeth A Znameroski et al. Biotechnology for Biofuels
- Crystal Structure and Computational Characterization of the Lytic Polysaccharide Monooxygenase GH61D from the Basidiomycota FungusPhanerochaete chrysosporium
- (2013) Miao Wu et al. JOURNAL OF BIOLOGICAL CHEMISTRY
- A C4-oxidizing Lytic Polysaccharide Monooxygenase Cleaving Both Cellulose and Cello-oligosaccharides
- (2013) Trine Isaksen et al. JOURNAL OF BIOLOGICAL CHEMISTRY
- Determinants of Regioselective Hydroxylation in the Fungal Polysaccharide Monooxygenases
- (2013) Van V. Vu et al. JOURNAL OF THE AMERICAN CHEMICAL SOCIETY
- Quantum mechanical calculations suggest that lytic polysaccharide monooxygenases use a copper-oxyl, oxygen-rebound mechanism
- (2013) S. Kim et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Novel enzymes for the degradation of cellulose
- (2012) Svein Horn et al. Biotechnology for Biofuels
- Binding Preferences, Surface Attachment, Diffusivity, and Orientation of a Family 1 Carbohydrate-binding Module on Cellulose
- (2012) Mark R. Nimlos et al. JOURNAL OF BIOLOGICAL CHEMISTRY
- Efficient separation of oxidized cello-oligosaccharides generated by cellulose degrading lytic polysaccharide monooxygenases
- (2012) Bjørge Westereng et al. JOURNAL OF CHROMATOGRAPHY A
- Structural Basis for Substrate Targeting and Catalysis by Fungal Polysaccharide Monooxygenases
- (2012) Xin Li et al. STRUCTURE
- A STRUCTURAL OVERVIEW OF GH61 PROTEINS – FUNGAL CELLULOSE DEGRADING POLYSACCHARIDE MONOOXYGENASES
- (2012) Leila Lo Leggio et al. Computational and Structural Biotechnology Journal
- An introduction to data reduction: space-group determination, scaling and intensity statistics
- (2011) Philip R. Evans ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY
- Oxidoreductive Cellulose Depolymerization by the Enzymes Cellobiose Dehydrogenase and Glycoside Hydrolase 61
- (2011) James A. Langston et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- CHARMM Additive All-Atom Force Field for Carbohydrate Derivatives and Its Utility in Polysaccharide and Carbohydrate–Protein Modeling
- (2011) Olgun Guvench et al. Journal of Chemical Theory and Computation
- Molecular-Level Origins of Biomass Recalcitrance: Decrystallization Free Energies for Four Common Cellulose Polymorphs
- (2011) Gregg T. Beckham et al. JOURNAL OF PHYSICAL CHEMISTRY B
- Oxidative Cleavage of Cellulose by Fungal Copper-Dependent Polysaccharide Monooxygenases
- (2011) William T. Beeson et al. JOURNAL OF THE AMERICAN CHEMICAL SOCIETY
- The Putative Endoglucanase PcGH61D from Phanerochaete chrysosporium Is a Metal-Dependent Oxidative Enzyme that Cleaves Cellulose
- (2011) Bjørge Westereng et al. PLoS One
- Insights into the oxidative degradation of cellulose by a copper metalloenzyme that exploits biomass components
- (2011) R. J. Quinlan et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- XDS
- (2010) Wolfgang Kabsch ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY
- PHENIX: a comprehensive Python-based system for macromolecular structure solution
- (2010) Paul D. Adams et al. ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY
- Stimulation of Lignocellulosic Biomass Hydrolysis by Proteins of Glycoside Hydrolase Family 61: Structure and Function of a Large, Enigmatic Family
- (2010) Paul V. Harris et al. BIOCHEMISTRY
- An Oxidative Enzyme Boosting the Enzymatic Conversion of Recalcitrant Polysaccharides
- (2010) Gustav Vaaje-Kolstad et al. SCIENCE
- MolProbity: all-atom structure validation for macromolecular crystallography
- (2009) Vincent B. Chen et al. ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY
- Transcriptome and Secretome Analyses of Phanerochaete chrysosporium Reveal Complex Patterns of Gene Expression
- (2009) A. Vanden Wymelenberg et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- CHARMM Additive All-Atom Force Field for Glycosidic Linkages between Hexopyranoses
- (2009) Olgun Guvench et al. Journal of Chemical Theory and Computation
- CHARMM: The biomolecular simulation program
- (2009) B. R. Brooks et al. JOURNAL OF COMPUTATIONAL CHEMISTRY
- CHAINSAW: a program for mutating pdb files used as templates in molecular replacement
- (2008) Norman Stein JOURNAL OF APPLIED CRYSTALLOGRAPHY
- Additive empirical force field for hexopyranose monosaccharides
- (2008) Olgun Guvench et al. JOURNAL OF COMPUTATIONAL CHEMISTRY
- The First Structure of a Glycoside Hydrolase Family 61 Member, Cel61B from Hypocrea jecorina, at 1.6 Å Resolution
- (2008) Saeid Karkehabadi et al. JOURNAL OF MOLECULAR BIOLOGY
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