Metagenomics, culturomics, and the human gut microbiota

Interaction of gut microbiota with bile acid metabolism and its influence on disease states

(2016) Christopher Staley et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Formation of propionate and butyrate by the human colonic microbiota

(2016) Petra Louis et al.   ENVIRONMENTAL MICROBIOLOGY

Culturing of ‘unculturable’ human microbiota reveals novel taxa and extensive sporulation

(2016) Hilary P. Browne et al.   NATURE

Culture of previously uncultured members of the human gut microbiota by culturomics

(2016) Jean-Christophe Lagier et al.   Nature Microbiology

Increased Gut Redox and Depletion of Anaerobic and Methanogenic Prokaryotes in Severe Acute Malnutrition

(2016) Matthieu Million et al.   Scientific Reports

Glycans affect DNA extraction and induce substantial differences in gut metagenomic studies

(2016) Emmanouil Angelakis et al.   Scientific Reports

Insight into alteration of gut microbiota in Clostridium difficile infection and asymptomatic C. difficile colonization

(2015) Lihua Zhang et al.   ANAEROBE

The truth about metagenomics: quantifying and counteracting bias in 16S rRNA studies

(2015) J Paul Brooks et al.   BMC MICROBIOLOGY

Clostridium butyricumStrains and Dysbiosis Linked to Necrotizing Enterocolitis in Preterm Neonates

(2015) Nadim Cassir et al.   CLINICAL INFECTIOUS DISEASES

Rectal bacteriotherapy for recurrent Clostridium difficile-associated diarrhoea: results from a case series of 55 patients in Denmark 2000–2012

(2015) M. Tvede et al.   CLINICAL MICROBIOLOGY AND INFECTION

Quantitative Profiling of Colorectal Cancer-Associated Bacteria Reveals Associations between Fusobacterium spp., Enterotoxigenic Bacteroides fragilis (ETBF) and Clinicopathological Features of Colorectal Cancer

(2015) Katie S. Viljoen et al.   PLoS One

Taking a metagenomic view of human nutrition

(2012) Rachel J. Dutton et al.   CURRENT OPINION IN CLINICAL NUTRITION AND METABOLIC CARE

Human Gut Microbiota: Repertoire and Variations

(2012) Jean-Christophe Lagier et al.   Frontiers in Cellular and Infection Microbiology

A human gut microbial gene catalogue established by metagenomic sequencing

(2010) Junjie Qin et al.   NATURE