Metabolic model-based analysis of the emergence of bacterial cross-feeding via extensive gene loss
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Title
Metabolic model-based analysis of the emergence of bacterial cross-feeding via extensive gene loss
Authors
Keywords
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Journal
BMC Systems Biology
Volume 12, Issue 1, Pages -
Publisher
Springer Nature
Online
2018-06-15
DOI
10.1186/s12918-018-0588-4
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- The Tiniest Tiny Genomes
- (2014) Nancy A. Moran et al. Annual Review of Microbiology
- Sympatric Speciation in a Bacterial Endosymbiont Results in Two Genomes with the Functionality of One
- (2014) James T. Van Leuven et al. CELL
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- (2014) Glen D'Souza et al. EVOLUTION
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- (2014) Nuno M. Oliveira et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
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- (2011) John P. McCutcheon et al. NATURE REVIEWS MICROBIOLOGY
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- (2010) Jessica R. Sieber et al. Annual Review of Microbiology
- Dynamics in the mixed microbial concourse
- (2010) E. H. Wintermute et al. GENES & DEVELOPMENT
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- (2010) Jeffrey D Orth et al. NATURE BIOTECHNOLOGY
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