Mapping QTLs for water-use efficiency reveals the potential candidate genes involved in regulating the trait in apple under drought stress

Comprehensive genomic analysis and expression profiling of Argonaute gene family and examination of their regulatory roles in water-use efficiency and abiotic stress responses in apple

(2016) Shasha Zhou et al.   ACTA PHYSIOLOGIAE PLANTARUM

Basic leucine zipper (bZIP) transcription factors involved in abiotic stresses: A molecular model of a wheat bZIP factor and implications of its structure in function

(2016) Pradeep Sornaraj et al.   BIOCHIMICA ET BIOPHYSICA ACTA-GENERAL SUBJECTS

A dense SNP genetic map constructed using restriction site-associated DNA sequencing enables detection of QTLs controlling apple fruit quality

(2015) Rui Sun et al.   BMC GENOMICS

Comparison of Kompetitive Allele Specific PCR (KASP) and genotyping by sequencing (GBS) for quality control analysis in maize

(2015) Berhanu Tadesse Ertiro et al.   BMC GENOMICS

Construction of a high-density genetic map and QTLs mapping for sugars and acids in grape berries

(2015) Jie Chen et al.   BMC PLANT BIOLOGY

Candidate gene prediction via quantitative trait locus analysis of fruit shape index traits in apple

(2015) Ke Cao et al.   EUPHYTICA

Multispectral airborne imagery in the field reveals genetic determinisms of morphological and transpiration traits of an apple tree hybrid population in response to water deficit

(2015) Nicolas Virlet et al.   JOURNAL OF EXPERIMENTAL BOTANY

PdEPF1regulates water-use efficiency and drought tolerance by modulating stomatal density in poplar

(2015) Congpeng Wang et al.   PLANT BIOTECHNOLOGY JOURNAL

Physiological and proteome analysis suggest critical roles for the photosynthetic system for high water-use efficiency under drought stress in Malus

(2015) Shasha Zhou et al.   PLANT SCIENCE

Construction of a high density linkage map and its application in the identification of QTLs for soluble sugar and organic acid components in apple

(2015) Baiquan Ma et al.   Tree Genetics & Genomes

The Characters of Dry Soil Layer on the Loess Plateau in China and Their Influencing Factors

(2015) Weiming Yan et al.   PLoS One

Genetic control of functional traits related to photosynthesis and water use efficiency in Pinus pinaster Ait. drought response: integration of genome annotation, allele association and QTL detection for candidate gene identification

(2014) Marina de Miguel et al.   BMC GENOMICS

Genome-wide identification and expression profiling of the SnRK2 gene family in Malus prunifolia

(2014) Yun Shao et al.   GENE

High-density genetic linkage map construction and identification of fruit-related QTLs in pear using SNP and SSR markers

(2014) Jun Wu et al.   JOURNAL OF EXPERIMENTAL BOTANY

Overexpression of tomato chloroplast-targeted DnaJ protein enhances tolerance to drought stress and resistance to Pseudomonas solanacearum in transgenic tobacco

(2014) Guodong Wang et al.   PLANT PHYSIOLOGY AND BIOCHEMISTRY

An analysis of ash and isotopic carbon discrimination (Δ13C) methods to evaluate water use efficiency in apple

(2014) D. Michael Glenn   SCIENTIA HORTICULTURAE

Molecular genetics and genomics of the Rosoideae: state of the art and future perspectives

(2014) Sara Longhi et al.   Horticulture Research

Validation of a functional molecular marker suitable for marker-assisted breeding for fruit texture in apple (Malus × domestica Borkh.)

(2013) Sara Longhi et al.   MOLECULAR BREEDING

Single nucleotide polymorphism genotyping using Kompetitive Allele Specific PCR (KASP): overview of the technology and its application in crop improvement

(2013) Kassa Semagn et al.   MOLECULAR BREEDING

Growing water scarcity in agriculture: future challenge to global water security

(2013) M. Falkenmark   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY A-MATHEMATICAL PHYSICAL AND ENGINEERING SCIENCES

A systems biology perspective on the role of WRKY transcription factors in drought responses in plants

(2013) Prateek Tripathi et al.   PLANTA

QTL and candidate gene mapping for polyphenolic composition in apple fruit

(2012) David Chagné et al.   BMC PLANT BIOLOGY

Towards the development of molecular markers for apple volatiles

(2012) Detlef Ulrich et al.   FLAVOUR AND FRAGRANCE JOURNAL

Rootstock control of scion transpiration and its acclimation to water deficit are controlled by different genes

(2012) Elisa Marguerit et al.   NEW PHYTOLOGIST

Growth, biomass allocation, and water use efficiency of 31 apple cultivars grown under two water regimes

(2011) Binghua Liu et al.   AGROFORESTRY SYSTEMS

Identification of SNP and SSR markers in eggplant using RAD tag sequencing

(2011) Lorenzo Barchi et al.   BMC GENOMICS

Construction and application for QTL analysis of a Restriction Site Associated DNA (RAD) linkage map in barley

(2011) Yada Chutimanitsakun et al.   BMC GENOMICS

Comprehensive QTL mapping survey dissects the complex fruit texture physiology in apple (Malus x domestica Borkh.).

(2011) Sara Longhi et al.   JOURNAL OF EXPERIMENTAL BOTANY

Genetic control of biennial bearing in apple

(2011) Baptiste Guitton et al.   JOURNAL OF EXPERIMENTAL BOTANY

Genetic determinism of anatomical and hydraulic traits within an apple progeny

(2011) PIERRE-ÉRIC LAURI et al.   PLANT CELL AND ENVIRONMENT

Biomass accumulation, allocation, and water-use efficiency in 10 Malus rootstocks under two watering regimes

(2010) Xiaowei Ma et al.   AGROFORESTRY SYSTEMS

The genome of the domesticated apple (Malus × domestica Borkh.)

(2010) Riccardo Velasco et al.   NATURE GENETICS

TheArabidopsisGTL1 Transcription Factor Regulates Water Use Efficiency and Drought Tolerance by Modulating Stomatal Density via Transrepression ofSDD1

(2010) Chan Yul Yoo et al.   PLANT CELL

Isolation and Characterization of a Novel Drought Responsive Gene Encoding a Glycine-rich RNA-binding Protein in Malus prunifolia (Willd.) Borkh.

(2010) Shuncai Wang et al.   PLANT MOLECULAR BIOLOGY REPORTER

The Sequence Alignment/Map format and SAMtools

(2009) H. Li et al.   BIOINFORMATICS

Fast and accurate short read alignment with Burrows-Wheeler transform

(2009) H. Li et al.   BIOINFORMATICS

The diversity of 13C isotope discrimination in a Quercus robur full-sib family is associated with differences in intrinsic water use efficiency, transpiration efficiency, and stomatal conductance

(2009) Magali Roussel et al.   JOURNAL OF EXPERIMENTAL BOTANY

Arabidopsis STN7 Kinase Provides a Link between Short- and Long-Term Photosynthetic Acclimation

(2009) P. Pesaresi et al.   PLANT CELL

Fine mapping a QTL for carbon isotope composition in tomato

(2008) Xiangyang Xu et al.   THEORETICAL AND APPLIED GENETICS