The genomic features of parasitism, Polyembryony and immune evasion in the endoparasitic wasp Macrocentrus cingulum

MicroRNA-14 regulates larval development time in Bombyx mori

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Regulation of cell differentiation and function by the euchromatin histone methyltranserfases G9a and GLP

(2016) Jamie M. Kramer   Biochemistry and Cell Biology

Comparing parasitoid life histories

(2016) Peter J. Mayhew   ENTOMOLOGIA EXPERIMENTALIS ET APPLICATA

MEGA7: Molecular Evolutionary Genetics Analysis Version 7.0 for Bigger Datasets

(2016) Sudhir Kumar et al.   MOLECULAR BIOLOGY AND EVOLUTION

Cotesia vestalis teratocytes express a diversity of genes and exhibit novel immune functions in parasitism

(2016) Fei Gao et al.   Scientific Reports

Two types of embryos with different functions are generated in the polyembryonic wasp Macrocentrus cingulum (Hymenoptera: Braconidae)

(2015) Jian Hu et al.   ARTHROPOD STRUCTURE & DEVELOPMENT

BUSCO: assessing genome assembly and annotation completeness with single-copy orthologs

(2015) Felipe A. Simão et al.   BIOINFORMATICS

Genomewide identification of target genes of histone methyltransferase dG9a duringDrosophilaembryogenesis

(2015) Kouhei Shimaji et al.   GENES TO CELLS

Guanine nucleotide exchange factor 2 for Rab5 proteins coordinated with GLUP6/GEF regulates the intracellular transport of the proglutelin from the Golgi apparatus to the protein storage vacuole in rice endosperm

(2015) Liuying Wen et al.   JOURNAL OF EXPERIMENTAL BOTANY

GenBank

(2015) Karen Clark et al.   NUCLEIC ACIDS RESEARCH

InsectBase: a resource for insect genomes and transcriptomes

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Immune Evasion Strategies ofTrypanosoma cruzi

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Trimmomatic: a flexible trimmer for Illumina sequence data

(2014) Anthony M. Bolger et al.   BIOINFORMATICS

Characterization of Genetic Diversity in the NematodePristionchus pacificusfrom Population-Scale Resequencing Data

(2014) Christian Rödelsperger et al.   GENETICS

Hemomucin, an O-Glycosylated Protein on Embryos of the WaspMacrocentrus cingulumThat Protects It against Encapsulation by Hemocytes of the HostOstrinia furnacalis

(2014) Jian Hu et al.   Journal of Innate Immunity

OMIGA: Optimized Maker-Based Insect Genome Annotation

(2014) Jinding Liu et al.   MOLECULAR GENETICS AND GENOMICS

Integration of mapped RNA-Seq reads into automatic training of eukaryotic gene finding algorithm

(2014) Alexandre Lomsadze et al.   NUCLEIC ACIDS RESEARCH

Gene Expression of Protein-Coding and Non-Coding RNAs Related to Polyembryogenesis in the Parasitic Wasp, Copidosoma floridanum

(2014) Hiroki Inoue et al.   PLoS One

Compact genome of the Antarctic midge is likely an adaptation to an extreme environment

(2014) Joanna L. Kelley et al.   Nature Communications

Widespread Genome Reorganization of an Obligate Virus Mutualist

(2014) Gaelen R. Burke et al.   PLoS Genetics

Analysis of odorant-binding protein gene family members in the polyembryonic wasp, Copidosoma floridanum: Evidence for caste bias and host interaction

(2013) David M. Donnell   JOURNAL OF INSECT PHYSIOLOGY

EHMT1 controls brown adipose cell fate and thermogenesis through the PRDM16 complex

(2013) Haruya Ohno et al.   NATURE

A heterozygous moth genome provides insights into herbivory and detoxification

(2013) Minsheng You et al.   NATURE GENETICS

miRBase: annotating high confidence microRNAs using deep sequencing data

(2013) Ana Kozomara et al.   NUCLEIC ACIDS RESEARCH

Polydnavirus-wasp associations: evolution, genome organization, and function

(2013) Michael R Strand et al.   Current Opinion in Virology

Obligate mutualism within a host drives the extreme specialization of a fig wasp genome

(2013) Jin-Hua Xiao et al.   GENOME BIOLOGY

Suitability of threeOstriniaspecies as hosts forMacrocentrus cingulum: A comparison of their encapsulation abilities

(2012) Sébastien Havard et al.   Insect Science

Autocrine Platelet-derived Growth Factor-Vascular Endothelial Growth Factor Receptor-related (Pvr) Pathway Activity Controls Intestinal Stem Cell Proliferation in the AdultDrosophilaMidgut

(2012) David Bond et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Differential gene and transcript expression analysis of RNA-seq experiments with TopHat and Cufflinks

(2012) Cole Trapnell et al.   Nature Protocols

A beginner's guide to eukaryotic genome annotation

(2012) Mark Yandell et al.   NATURE REVIEWS GENETICS

Estimating divergence times in large molecular phylogenies

(2012) K. Tamura et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Polydnaviruses as Symbionts and Gene Delivery Systems

(2012) Michael R. Strand et al.   PLoS Pathogens

SOAPdenovo2: an empirically improved memory-efficient short-read de novo assembler

(2012) Ruibang Luo et al.   GigaScience

The state of commercial augmentative biological control: plenty of natural enemies, but a frustrating lack of uptake

(2011) Joop C. van Lenteren   BIOCONTROL

A fast, lock-free approach for efficient parallel counting of occurrences of k-mers

(2011) Guillaume Marçais et al.   BIOINFORMATICS

Hairless is a cofactor for Runt-dependent transcriptional regulation

(2011) Pegine B. Walrad et al.   MOLECULAR BIOLOGY OF THE CELL

Full-length transcriptome assembly from RNA-Seq data without a reference genome

(2011) Manfred G Grabherr et al.   NATURE BIOTECHNOLOGY

Scaffolding pre-assembled contigs using SSPACE

(2010) Marten Boetzer et al.   BIOINFORMATICS

MapMi: automated mapping of microRNA loci

(2010) Jose Afonso Guerra-Assuncao et al.   BMC BIOINFORMATICS

Inhibition of microRNA-14 contributes to actinomycin-D-induced apoptosis in the Sf9 insect cell line

(2010) Regalla Kumarswamy et al.   CELL BIOLOGY INTERNATIONAL

Drosophila miR-14 regulates insulin production and metabolism through its target, sugarbabe

(2010) J. Varghese et al.   GENES & DEVELOPMENT

REVIEW: The evolution of polyembryony in parasitoid wasps

(2010) M. SEGOLI et al.   JOURNAL OF EVOLUTIONARY BIOLOGY

Myc Promoter-Binding Protein-1 (MBP-1) Is a Novel Potential Prognostic Marker in Invasive Ductal Breast Carcinoma

(2010) Mariavera Lo Presti et al.   PLoS One

Genome sequences of the human body louse and its primary endosymbiont provide insights into the permanent parasitic lifestyle

(2010) E. F. Kirkness et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Functional and Evolutionary Insights from the Genomes of Three Parasitoid Nasonia Species

(2010) J. H. Werren et al.   SCIENCE

Learning from Jekyll to control Hyde: Hedgehog signaling in development and cancer

(2010) Monique T. Barakat et al.   TRENDS IN MOLECULAR MEDICINE

Steric Shielding of Surface Epitopes and Impaired Immune Recognition Induced by the Ebola Virus Glycoprotein

(2010) Joseph R. Francica et al.   PLoS Pathogens

Infernal 1.0: inference of RNA alignments

(2009) E. P. Nawrocki et al.   BIOINFORMATICS

TopHat: discovering splice junctions with RNA-Seq

(2009) Cole Trapnell et al.   BIOINFORMATICS

ABySS: A parallel assembler for short read sequence data

(2009) J. T. Simpson et al.   GENOME RESEARCH

Ebolavirus Glycoprotein GP Masks both Its Own Epitopes and the Presence of Cellular Surface Proteins

(2009) O. Reynard et al.   JOURNAL OF VIROLOGY

The sequence and de novo assembly of the giant panda genome

(2009) Ruiqiang Li et al.   NATURE

Ultrafast and memory-efficient alignment of short DNA sequences to the human genome

(2009) Ben Langmead et al.   GENOME BIOLOGY

A Helix pomatia lectin binding protein on the extraembryonic membrane of the polyembryonic wasp Macrocentrus cingulum protects embryos from being encapsulated by hemocytes of host Ostrinia furnaclis

(2007) Jian Hu et al.   DEVELOPMENTAL AND COMPARATIVE IMMUNOLOGY