A multi-omics approach reveals function of Secretory Carrier-Associated Membrane Proteins in wood formation of​ ​​Populus​​ ​trees

AspWood: High-Spatial-Resolution Transcriptome Profiles Reveal Uncharacterized Modularity of Wood Formation in Populus tremula

(2017) David Sundell et al.   PLANT CELL

Quantitative proteomics reveals protein profiles underlying major transitions in aspen wood development

(2016) Ogonna Obudulu et al.   BMC GENOMICS

Editorial (Thematic Issue: Enhancement of Plant Productivity in the Post-Genomics Era)

(2016) Nguyen Phuong Thao et al.   CURRENT GENOMICS

2016 update of the PRIDE database and its related tools

(2016) Juan Antonio Vizcaíno et al.   NUCLEIC ACIDS RESEARCH

Combined transcript, proteome, and metabolite analysis of transgenic maize seeds engineered for enhanced carotenoid synthesis reveals pleotropic effects in core metabolism

(2015) Mathilde Decourcelle et al.   JOURNAL OF EXPERIMENTAL BOTANY

4-Coumaroyl and Caffeoyl Shikimic Acids Inhibit 4-Coumaric Acid:Coenzyme A Ligases and Modulate Metabolic Flux for 3-Hydroxylation in Monolignol Biosynthesis of Populus trichocarpa

(2015) Chien-Yuan Lin et al.   Molecular Plant

Expression of a fungal glucuronoyl esterase in Populus: Effects on wood properties and saccharification efficiency

(2015) Madhavi Latha Gandla et al.   PHYTOCHEMISTRY

HTSeq--a Python framework to work with high-throughput sequencing data

(2014) S. Anders et al.   BIOINFORMATICS

Discovery of human urinary biomarkers of aronia-citrus juice intake by HPLC-q-TOF-based metabolomic approach

(2014) Rafael Llorach et al.   ELECTROPHORESIS

OnPLS integration of transcriptomic, proteomic and metabolomic data shows multi-level oxidative stress responses in the cambium of transgenic hipI- superoxide dismutase Populus plants

(2013) Vaibhav Srivastava et al.   BMC GENOMICS

The genome portal of the Department of Energy Joint Genome Institute: 2014 updates

(2013) Henrik Nordberg et al.   NUCLEIC ACIDS RESEARCH

Individual Variation in Lipidomic Profiles of Healthy Subjects in Response to Omega-3 Fatty Acids

(2013) Malin L. Nording et al.   PLoS One

Improved saccharification and ethanol yield from field-grown transgenic poplar deficient in cinnamoyl-CoA reductase

(2013) R. Van Acker et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

STAR: ultrafast universal RNA-seq aligner

(2012) Alexander Dobin et al.   BIOINFORMATICS

OPTIMAS-DW: A comprehensive transcriptomics, metabolomics, ionomics, proteomics and phenomics data resource for maize

(2012) Christian Colmsee et al.   BMC PLANT BIOLOGY

OnPLS path modelling

(2012) Tommy Löfstedt et al.   CHEMOMETRICS AND INTELLIGENT LABORATORY SYSTEMS

AtABCG29 Is a Monolignol Transporter Involved in Lignin Biosynthesis

(2012) Santiago Alejandro et al.   CURRENT BIOLOGY

Can genetic engineering of lignin deposition be accomplished without an unacceptable yield penalty?

(2012) Nicholas D Bonawitz et al.   CURRENT OPINION IN BIOTECHNOLOGY

Multivariate curve resolution provides a high-throughput data processing pipeline for pyrolysis-gas chromatography/mass spectrometry

(2012) Lorenz Gerber et al.   JOURNAL OF ANALYTICAL AND APPLIED PYROLYSIS

Growth and root sucker ability of field-grown transgenic poplars overexpressing xyloglucanase

(2012) Toru Taniguchi et al.   JOURNAL OF WOOD SCIENCE

Berry skin development in Norton grape: Distinct patterns of transcriptional regulation and flavonoid biosynthesis

(2011) Mohammad B Ali et al.   BMC PLANT BIOLOGY

Metabolomics Unveils Urinary Changes in Subjects with Metabolic Syndrome following 12-Week Nut Consumption

(2011) Sara Tulipani et al.   JOURNAL OF PROTEOME RESEARCH

Phytozome: a comparative platform for green plant genomics

(2011) David M. Goodstein et al.   NUCLEIC ACIDS RESEARCH

Transgenic poplars with reduced lignin show impaired xylem conductivity, growth efficiency and survival

(2011) STEVEN L. VOELKER et al.   PLANT CELL AND ENVIRONMENT

Secretory carrier membrane proteins

(2011) Angus Ho Yin Law et al.   PROTOPLASMA

Metabolomics Study of Human Urinary Metabolome Modifications After Intake of Almond (Prunus dulcis(Mill.) D.A. Webb) Skin Polyphenols

(2010) Rafael Llorach et al.   JOURNAL OF PROTEOME RESEARCH

ATP-binding cassette-like transporters are involved in the transport of lignin precursors across plasma and vacuolar membranes

(2010) Y.-C. Miao et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

An LC-MS-Based Metabolomics Approach for Exploring Urinary Metabolome Modifications after Cocoa Consumption

(2009) Rafael Llorach et al.   JOURNAL OF PROTEOME RESEARCH

Quantitative genetic analysis of biomass and wood chemistry ofPopulusunder different nitrogen levels

(2009) Evandro Novaes et al.   NEW PHYTOLOGIST

A Mobile Secretory Vesicle Cluster Involved in Mass Transport from the Golgi to the Plant Cell Exterior

(2009) K. Toyooka et al.   PLANT CELL

Vacuolar sorting receptors (VSRs) and secretory carrier membrane proteins (SCAMPs) are essential for pollen tube growth

(2009) Hao Wang et al.   PLANT JOURNAL

Mutations in UDP-Glucose:Sterol Glucosyltransferase in Arabidopsis Cause Transparent Testa Phenotype and Suberization Defect in Seeds

(2009) S. DeBolt et al.   PLANT PHYSIOLOGY

Sucrose synthase affects carbon partitioning to increase cellulose production and altered cell wall ultrastructure

(2009) H. D. Coleman et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Sealing Plant Surfaces: Cuticular Wax Formation by Epidermal Cells

(2008) Lacey Samuels et al.   Annual Review of Plant Biology

Phase Transfer Surfactant-Aided Trypsin Digestion for Membrane Proteome Analysis

(2008) Takeshi Masuda et al.   JOURNAL OF PROTEOME RESEARCH

Suppression of 4-Coumarate-CoA Ligase in the Coniferous Gymnosperm Pinus radiata

(2008) A. Wagner et al.   PLANT PHYSIOLOGY

Visualization of GC/TOF-MS-Based Metabolomics Data for Identification of Biochemically Interesting Compounds Using OPLS Class Models

(2007) Susanne Wiklund et al.   ANALYTICAL CHEMISTRY