Genotype imputation from various low-density SNP panels and its impact on accuracy of genomic breeding values in pigs

Using genomics to enhance selection of novel traits in North American dairy cattle 1 , 2

(2016) J.P. Chesnais et al.   JOURNAL OF DAIRY SCIENCE

Evaluation of measures of correctness of genotype imputation in the context of genomic prediction: a review of livestock applications

(2014) M. P. L. Calus et al.   Animal

Imputation of missing genotypes from low- to high-density SNP panel in different population designs

(2014) S. He et al.   ANIMAL GENETICS

A new approach for efficient genotype imputation using information from relatives

(2014) Mehdi Sargolzaei et al.   BMC GENOMICS

The development of genomics applied to dairy breeding

(2014) Marcos V.B. Silva et al.   Livestock Science

Accuracy of Estimation of Genomic Breeding Values in Pigs Using Low-Density Genotypes and Imputation

(2014) Yvonne M. Badke et al.   G3-Genes Genomes Genetics

Improving the Accuracy and Efficiency of Identity-by-Descent Detection in Population Data

(2013) B. L. Browning et al.   GENETICS

Practical implementation of cost-effective genomic selection in commercial pig breeding using imputation1

(2013) M. A. Cleveland et al.   JOURNAL OF ANIMAL SCIENCE

A first step toward genomic selection in the multi-breed French dairy goat population

(2013) C. Carillier et al.   JOURNAL OF DAIRY SCIENCE

Comparison of different methods for imputing genome-wide marker genotypes in Swedish and Finnish Red Cattle

(2013) P. Ma et al.   JOURNAL OF DAIRY SCIENCE

Accuracy of genomic prediction using an evenly spaced, low-density single nucleotide polymorphism panel in broiler chickens

(2013) C. Wang et al.   POULTRY SCIENCE

Accelerating Improvement of Livestock with Genomic Selection

(2013) Theo Meuwissen et al.   Annual Review of Animal Biosciences

Comparison of different imputation methods from low- to high-density panels using Chinese Holstein cattle

(2012) Z. Weng et al.   Animal

Strategies and utility of imputed SNP genotypes for genomic analysis in dairy cattle

(2012) Mehar S Khatkar et al.   BMC GENOMICS

A Common Dataset for Genomic Analysis of Livestock Populations

(2012) Matthew A. Cleveland et al.   G3-Genes Genomes Genetics

Genomic selection for maternal traits in pigs

(2011) M. Lillehammer et al.   JOURNAL OF ANIMAL SCIENCE

Reliabilities of genomic prediction using combined reference data of the Nordic Red dairy cattle populations

(2011) R.F. Brøndum et al.   JOURNAL OF DAIRY SCIENCE

A Unified Approach to Genotype Imputation and Haplotype-Phase Inference for Large Data Sets of Trios and Unrelated Individuals

(2009) Brian L. Browning et al.   AMERICAN JOURNAL OF HUMAN GENETICS

Selection of single-nucleotide polymorphisms and quality of genotypes used in genomic evaluation of dairy cattle in the United States and Canada

(2009) G.R. Wiggans et al.   JOURNAL OF DAIRY SCIENCE

A Flexible and Accurate Genotype Imputation Method for the Next Generation of Genome-Wide Association Studies

(2009) Bryan N. Howie et al.   PLoS Genetics

Efficient Methods to Compute Genomic Predictions

(2008) P.M. VanRaden   JOURNAL OF DAIRY SCIENCE