Links of gut microbiota composition with alcohol dependence syndrome and alcoholic liver disease

Abundance profiling of specific gene groups using precomputed gut metagenomes yields novel biological hypotheses

(2017) Konstantin Yarygin et al.   PLoS One

Major Anaerobic Bacteria Responsible for the Production of Carcinogenic Acetaldehyde from Ethanol in the Colon and Rectum

(2016) Atsuki Tsuruya et al.   ALCOHOL AND ALCOHOLISM

MetaFast: fast reference-free graph-based comparison of shotgun metagenomic data

(2016) Vladimir I. Ulyantsev et al.   BIOINFORMATICS

Assessment of k-mer spectrum applicability for metagenomic dissimilarity analysis

(2016) Veronika B. Dubinkina et al.   BMC BIOINFORMATICS

Intestinal Crosstalk between Bile Acids and Microbiota and Its Impact on Host Metabolism

(2016) Annika Wahlström et al.   Cell Metabolism

Diet–microbiota interactions as moderators of human metabolism

(2016) Justin L. Sonnenburg et al.   NATURE

GABA-producing Bifidobacterium dentium modulates visceral sensitivity in the intestine

(2016) K. Pokusaeva et al.   NEUROGASTROENTEROLOGY AND MOTILITY

The role of the gut–brain axis in alcohol use disorders

(2016) Jonathan Gorky et al.   PROGRESS IN NEURO-PSYCHOPHARMACOLOGY & BIOLOGICAL PSYCHIATRY

Ecophysiological consequences of alcoholism on human gut microbiota: implications for ethanol-related pathogenesis of colon cancer

(2016) Atsuki Tsuruya et al.   Scientific Reports

Review article: alcohol and gut microbiota - the possible role of gut microbiota modulation in the treatment of alcoholic liver disease

(2015) G. Vassallo et al.   ALIMENTARY PHARMACOLOGY & THERAPEUTICS

Indigenous Bacteria from the Gut Microbiota Regulate Host Serotonin Biosynthesis

(2015) Jessica M. Yano et al.   CELL

Inflammation, Antibiotics, and Diet as Environmental Stressors of the Gut Microbiome in Pediatric Crohn’s Disease

(2015) James D. Lewis et al.   Cell Host & Microbe

Gut Microbiota, Cirrhosis, and Alcohol Regulate Bile Acid Metabolism in the Gut

(2015) Jason M. Ridlon et al.   DIGESTIVE DISEASES

Intestinal microbiota contributes to individual susceptibility to alcoholic liver disease

(2015) M Llopis et al.   GUT

Decompensated cirrhosis and microbiome interpretation

(2015) Jasmohan S. Bajaj et al.   NATURE

MetaPhlAn2 for enhanced metagenomic taxonomic profiling

(2015) Duy Tin Truong et al.   NATURE METHODS

Specific features of the enteric microbiota composition in patients with alcoholic liver cirrhosis

(2015) N. V. Shalikiani et al.   TERAPEVTICHESKII ARKHIV

Fecal microbiota transplantation as novel therapy in gastroenterology: A systematic review

(2015) Noortje G Rossen   WORLD JOURNAL OF GASTROENTEROLOGY

Changes in gut bacterial populations and their translocation into liver and ascites in alcoholic liver cirrhotics

(2014) Sari Tuomisto et al.   BMC GASTROENTEROLOGY

The Microbiome in Inflammatory Bowel Disease: Current Status and the Future Ahead

(2014) Aleksandar D. Kostic et al.   GASTROENTEROLOGY

Alcohol and mortality in Russia: prospective observational study of 151 000 adults

(2014) David Zaridze et al.   LANCET

An integrated catalog of reference genes in the human gut microbiome

(2014) Junhua Li et al.   NATURE BIOTECHNOLOGY

Psychobiotics: A Novel Class of Psychotropic

(2013) Timothy G. Dinan et al.   BIOLOGICAL PSYCHIATRY

Altered profile of human gut microbiome is associated with cirrhosis and its complications

(2013) Jasmohan S. Bajaj et al.   JOURNAL OF HEPATOLOGY

Enriching the gene set analysis of genome-wide data by incorporating directionality of gene expression and combining statistical hypotheses and methods

(2013) Leif Väremo et al.   NUCLEIC ACIDS RESEARCH

Metagenomic Analyses of Alcohol Induced Pathogenic Alterations in the Intestinal Microbiome and the Effect of Lactobacillus rhamnosus GG Treatment

(2013) Lara Bull-Otterson et al.   PLoS One

Human gut microbiota community structures in urban and rural populations in Russia

(2013) Alexander V. Tyakht et al.   Nature Communications

Influence of red wine polyphenols and ethanol on the gut microbiota ecology and biochemical biomarkers

(2012) María Isabel Queipo-Ortuño et al.   AMERICAN JOURNAL OF CLINICAL NUTRITION

Colonic microbiome is altered in alcoholism

(2012) Ece A. Mutlu et al.   AMERICAN JOURNAL OF PHYSIOLOGY-GASTROINTESTINAL AND LIVER PHYSIOLOGY

Intestinal Domination and the Risk of Bacteremia in Patients Undergoing Allogeneic Hematopoietic Stem Cell Transplantation

(2012) Ying Taur et al.   CLINICAL INFECTIOUS DISEASES

The gut microbiota and the liver. Pathophysiological and clinical implications

(2012) Eamonn M.M. Quigley et al.   JOURNAL OF HEPATOLOGY

Dysfunction of the intestinal microbiome in inflammatory bowel disease and treatment

(2012) Xochitl C Morgan et al.   GENOME BIOLOGY

Gut-Liver Axis and Sensing Microbes

(2011) Gyongyi Szabo et al.   DIGESTIVE DISEASES

Characterization of fecal microbial communities in patients with liver cirrhosis

(2011) Yanfei Chen et al.   HEPATOLOGY

VFDB 2012 update: toward the genetic diversity and molecular evolution of bacterial virulence factors

(2011) L. Chen et al.   NUCLEIC ACIDS RESEARCH

The ADH1B Arg47His polymorphism in East Asian populations and expansion of rice domestication in history

(2010) Yi Peng et al.   BMC EVOLUTIONARY BIOLOGY

The role of the gut microbiota in nonalcoholic fatty liver disease

(2010) Ahmed Abu-Shanab et al.   Nature Reviews Gastroenterology & Hepatology

Ultrafast and memory-efficient alignment of short DNA sequences to the human genome

(2009) Ben Langmead et al.   GENOME BIOLOGY