K-mer Content, Correlation, and Position Analysis of Genome DNA Sequences for the Identification of Function and Evolutionary Features

An alignment-free method to find and visualise rearrangements between pairs of DNA sequences

(2015) Diogo Pratas et al.   Scientific Reports

Next-generation phylogenomics

(2013) Cheong Xin Chan et al.   Biology Direct

Comparative analysis using K-mer and K-flank patterns provides evidence for CpG island sequence evolution in mammalian genomes

(2013) H. Chae et al.   NUCLEIC ACIDS RESEARCH

Resolving Prokaryotic Taxonomy without rRNA: Longer Oligonucleotide Word Lengths Improve Genome and Metagenome Taxonomic Classification

(2013) Eric B. Alsop et al.   PLoS One

Evolution of sexually transmitted and sexually transmissible human herpesviruses

(2012) Andrew J. Davison   Annals of the New York Academy of Sciences

A fast, lock-free approach for efficient parallel counting of occurrences of k-mers

(2011) Guillaume Marçais et al.   BIOINFORMATICS

Barcodes for genomes and applications

(2008) Fengfeng Zhou et al.   BMC BIOINFORMATICS

Both selective and neutral processes drive GC content evolution in the human genome

(2008) Uberto Pozzoli et al.   BMC EVOLUTIONARY BIOLOGY

Malaria research in the post-genomic era

(2008) Elizabeth Ann Winzeler   NATURE

Presence and role of cytosine methylation in DNA viruses of animals

(2008) K. Hoelzer et al.   NUCLEIC ACIDS RESEARCH