The origins and evolutionary history of human non-coding RNA regulatory networks

Evolutionary hallmarks of the human proteome: chasing the age and coregulation of protein-coding genes

(2016) Katia de Paiva Lopes et al.   BMC GENOMICS

Towards Consensus Gene Ages

(2016) Benjamin J. Liebeskind et al.   Genome Biology and Evolution

Validated MicroRNA Target Databases: An Evaluation

(2015) Yun Ji Diana Lee et al.   DRUG DEVELOPMENT RESEARCH

The rise of regulatory RNA

(2014) Kevin V. Morris et al.   NATURE REVIEWS GENETICS

Long Noncoding RNAs: Past, Present, and Future

(2013) J. T. Y. Kung et al.   GENETICS

Analysis of CDS-located miRNA target sites suggests that they can effectively inhibit translation

(2013) J. Hausser et al.   GENOME RESEARCH

Regulatory mechanisms of long noncoding RNAs in vertebrate central nervous system development and function

(2013) J.L. Knauss et al.   NEUROSCIENCE

miRcode: a map of putative microRNA target sites in the long non-coding transcriptome

(2012) Ashwini Jeggari et al.   BIOINFORMATICS

The GENCODE v7 catalog of human long noncoding RNAs: Analysis of their gene structure, evolution, and expression

(2012) T. Derrien et al.   GENOME RESEARCH

Practical Aspects of microRNA Target Prediction

(2011) T. M. Witkos et al.   CURRENT MOLECULAR MEDICINE

The Accumulation of Gene Regulation Through Time

(2011) Maria Warnefors et al.   Genome Biology and Evolution

Identification of putative miRNAs from the deep-branching unicellular flagellates

(2011) Po-Jung Huang et al.   GENOMICS

The Impact of miRNA Target Sites in Coding Sequences and in 3′UTRs

(2011) Zhuo Fang et al.   PLoS One

The Cambrian Conundrum: Early Divergence and Later Ecological Success in the Early History of Animals

(2011) D. H. Erwin et al.   SCIENCE

THOC5/FMIP, an mRNA export TREX complex protein, is essential for hematopoietic primitive cell survival in vivo

(2010) Annalisa Mancini et al.   BMC BIOLOGY

Mapping the face in the somatosensory brainstem

(2010) Reha S. Erzurumlu et al.   NATURE REVIEWS NEUROSCIENCE

miRTarBase: a database curates experimentally validated microRNA–target interactions

(2010) Sheng-Da Hsu et al.   NUCLEIC ACIDS RESEARCH

ClueGO: a Cytoscape plug-in to decipher functionally grouped gene ontology and pathway annotation networks

(2009) Gabriela Bindea et al.   BIOINFORMATICS

New class of microRNA targets containing simultaneous 5'-UTR and 3'-UTR interaction sites

(2009) I. Lee et al.   GENOME RESEARCH

Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources

(2009) Da Wei Huang et al.   Nature Protocols

Early origins and evolution of microRNAs and Piwi-interacting RNAs in animals

(2008) Andrew Grimson et al.   NATURE

Bioinformatics enrichment tools: paths toward the comprehensive functional analysis of large gene lists

(2008) Da Wei Huang et al.   NUCLEIC ACIDS RESEARCH