Diversity in Grain Amaranths and Relatives Distinguished by Genotyping by Sequencing (GBS)
Published 2017 View Full Article
- Home
- Publications
- Publication Search
- Publication Details
Title
Diversity in Grain Amaranths and Relatives Distinguished by Genotyping by Sequencing (GBS)
Authors
Keywords
-
Journal
Frontiers in Plant Science
Volume 8, Issue -, Pages -
Publisher
Frontiers Media SA
Online
2017-11-17
DOI
10.3389/fpls.2017.01960
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- Analysis of phylogenetic relationships and genome size evolution of the Amaranthus genus using GBS indicates the ancestors of an ancient crop
- (2017) Markus G. Stetter et al. MOLECULAR PHYLOGENETICS AND EVOLUTION
- Insights on Structure and Function of a Late Embryogenesis Abundant Protein from Amaranthus cruentus: An Intrinsically Disordered Protein Involved in Protection against Desiccation, Oxidant Conditions, and Osmotic Stress
- (2017) Alma L. Saucedo et al. Frontiers in Plant Science
- Editorial: Protein Crops: Food and Feed for the Future
- (2017) Antonio M. De Ron et al. Frontiers in Plant Science
- Genetic diversity and population structure of native maize populations in Latin America and the Caribbean
- (2017) Claudia A. Bedoya et al. PLoS One
- MEGA7: Molecular Evolutionary Genetics Analysis Version 7.0 for Bigger Datasets
- (2016) Sudhir Kumar et al. MOLECULAR BIOLOGY AND EVOLUTION
- Comparative Proteomic Analysis of Differentially Expressed Proteins in Amaranthus hybridus L. Roots Under Cadmium Stress
- (2016) Haijun Jin et al. WATER AIR AND SOIL POLLUTION
- Molecular Dissection of Seedling Salinity Tolerance in Rice (Oryza sativa L.) Using a High-Density GBS-Based SNP Linkage Map
- (2016) Teresa B. De Leon et al. Rice
- Genotyping-by-Sequencing-Based Investigation of the Genetic Architecture Responsible for a ∼Sevenfold Increase in Soybean Seed Stearic Acid
- (2016) Crystal B. Heim et al. G3-Genes Genomes Genetics
- The Amaranth Genome: Genome, Transcriptome, and Physical Map Assembly
- (2016) J. W. Clouse et al. Plant Genome
- Identification of a Catalase-Phenol Oxidase in Betalain Biosynthesis in Red Amaranth (Amaranthus cruentus)
- (2016) Xiao-Lu Teng et al. Frontiers in Plant Science
- Crossing Methods and Cultivation Conditions for Rapid Production of Segregating Populations in Three Grain Amaranth Species
- (2016) Markus G. Stetter et al. Frontiers in Plant Science
- Overexpression of Grain Amaranth (Amaranthus hypochondriacus) AhERF or AhDOF Transcription Factors in Arabidopsis thaliana Increases Water Deficit- and Salt-Stress Tolerance, Respectively, via Contrasting Stress-Amelioration Mechanisms
- (2016) Julio A. Massange-Sánchez et al. PLoS One
- InteractiVenn: a web-based tool for the analysis of sets through Venn diagrams
- (2015) Henry Heberle et al. BMC BIOINFORMATICS
- Comparison of Kompetitive Allele Specific PCR (KASP) and genotyping by sequencing (GBS) for quality control analysis in maize
- (2015) Berhanu Tadesse Ertiro et al. BMC GENOMICS
- Genotyping-by-sequencing (GBS) identified SNP tightly linked to QTL for pre-harvest sprouting resistance
- (2015) Meng Lin et al. THEORETICAL AND APPLIED GENETICS
- The novel and taxonomically restricted Ah24 gene from grain amaranth (Amaranthus hypochondriacus) has a dual role in development and defense
- (2015) Julio A. Massange-Sanchez et al. Frontiers in Plant Science
- A rapid and reliable PCR-restriction fragment length polymorphism (RFLP) marker for the identification of Amaranthus cruentus species
- (2015) Young-Jun Park et al. BREEDING SCIENCE
- fastSTRUCTURE: Variational Inference of Population Structure in Large SNP Data Sets
- (2014) Anil Raj et al. GENETICS
- The Potential for Utilizing the Seed Crop Amaranth (Amaranthusspp.) in East Africa as an Alternative Crop to Support Food Security and Climate Change Mitigation
- (2014) F. Reta Alemayehu et al. JOURNAL OF AGRONOMY AND CROP SCIENCE
- Salt Stress-Induced Alterations in the Root Proteome of Amaranthus cruentus L.
- (2014) José A. Huerta-Ocampo et al. JOURNAL OF PROTEOME RESEARCH
- TASSEL-GBS: A High Capacity Genotyping by Sequencing Analysis Pipeline
- (2014) Jeffrey C. Glaubitz et al. PLoS One
- Genotyping-by-sequencing (GBS), an ultimate marker-assisted selection (MAS) tool to accelerate plant breeding
- (2014) Jiangfeng He et al. Frontiers in Plant Science
- Assessment of Genetic Diversity in Peruvian Amaranth ( and ) Germplasm using Single Nucleotide Polymorphism Markers
- (2013) Felix R. Jimenez et al. CROP SCIENCE
- Interhemispheric Temperature Asymmetry over the Twentieth Century and in Future Projections
- (2013) Andrew R. Friedman et al. JOURNAL OF CLIMATE
- Grain Amaranths Are Defoliation Tolerant Crop Species Capable of Utilizing Stem and Root Carbohydrate Reserves to Sustain Vegetative and Reproductive Growth after Leaf Loss
- (2013) Erandi Vargas-Ortiz et al. PLoS One
- Bridging the genotyping gap: using genotyping by sequencing (GBS) to add high-density SNP markers and new value to traditional bi-parental mapping and breeding populations
- (2013) Jennifer Spindel et al. THEORETICAL AND APPLIED GENETICS
- Single nucleotide polymorphism discovery in cutthroat trout subspecies using genome reduction, barcoding, and 454 pyro-sequencing
- (2012) Derek D Houston et al. BMC GENOMICS
- Metabolic and enzymatic changes associated with carbon mobilization, utilization and replenishment triggered in grain amaranth (Amaranthus cruentus) in response to partial defoliation by mechanical injury or insect herbivory
- (2012) Paula Castrillón-Arbeláez et al. BMC PLANT BIOLOGY
- Amaranth: A New Millennium Crop of Nutraceutical Values
- (2012) Anu Rastogi et al. CRITICAL REVIEWS IN FOOD SCIENCE AND NUTRITION
- Cost-effective, high-throughput DNA sequencing libraries for multiplexed target capture
- (2012) N. Rohland et al. GENOME RESEARCH
- State of Knowledge on Amaranth Grain: A Comprehensive Review
- (2012) Valéria Maria Caselato-Sousa et al. JOURNAL OF FOOD SCIENCE
- A Robust, Simple Genotyping-by-Sequencing (GBS) Approach for High Diversity Species
- (2011) Robert J. Elshire et al. PLoS One
- Development, Characterization, and Linkage Mapping of Single Nucleotide Polymorphisms in the Grain Amaranths (Amaranthus sp.)
- (2011) PJ. Maughan et al. Plant Genome
- Arlequin suite ver 3.5: a new series of programs to perform population genetics analyses under Linux and Windows
- (2010) LAURENT EXCOFFIER et al. Molecular Ecology Resources
- Water stress induces up-regulation of DOF1 and MIF1 transcription factors and down-regulation of proteins involved in secondary metabolism in amaranth roots (Amaranthus hypochondriacus L.)
- (2010) J. A. Huerta-Ocampo et al. PLANT BIOLOGY
- Fast and accurate short read alignment with Burrows-Wheeler transform
- (2009) H. Li et al. BIOINFORMATICS
- Diversity in phenotypic and nutritional traits in vegetable amaranth (Amaranthus tricolor), a nutritionally underutilised crop
- (2009) Sudhir Shukla et al. JOURNAL OF THE SCIENCE OF FOOD AND AGRICULTURE
Discover Peeref hubs
Discuss science. Find collaborators. Network.
Join a conversationBecome a Peeref-certified reviewer
The Peeref Institute provides free reviewer training that teaches the core competencies of the academic peer review process.
Get Started