Proteasome Activity Profiling Uncovers Alteration of Catalytic β2 and β5 Subunits of the Stress-Induced Proteasome during Salinity Stress in Tomato Roots

Subunit-selective proteasome activity profiling uncovers uncoupled proteasome subunit activities during bacterial infections

(2017) Johana C. Misas-Villamil et al.   PLANT JOURNAL

The Increasing Impact of Activity-Based Protein Profiling in Plant Science

(2016) Kyoko Morimoto et al.   PLANT AND CELL PHYSIOLOGY

2016 update of the PRIDE database and its related tools

(2015) Juan Antonio Vizcaíno et al.   NUCLEIC ACIDS RESEARCH

The mystery of underground death: cell death in roots during ontogeny and in response to environmental factors

(2015) A. Bagniewska-Zadworna et al.   PLANT BIOLOGY

The 26S proteasome is a multifaceted target for anti-cancer therapies

(2015) Tatyana A. Grigoreva et al.   Oncotarget

Opposite extremes in ethylene/nitric oxide ratio induce cell death in suspension culture and root apices of tomato exposed to salt stress

(2014) P. Poór et al.   ACTA BIOLOGICA HUNGARICA

Dynamic hydrolase activities precede hypersensitive tissue collapse in tomato seedlings

(2014) Daniela Sueldo et al.   NEW PHYTOLOGIST

SWISS-MODEL: modelling protein tertiary and quaternary structure using evolutionary information

(2014) Marco Biasini et al.   NUCLEIC ACIDS RESEARCH

Identification of Oxidatively Modified Proteins in Salt-Stressed Arabidopsis: A Carbonyl-Targeted Proteomics Approach

(2014) Jun’ichi Mano et al.   PLANT AND CELL PHYSIOLOGY

Regulation of cardiac proteasomes by ubiquitination, SUMOylation, and beyond

(2013) Ziyou Cui et al.   JOURNAL OF MOLECULAR AND CELLULAR CARDIOLOGY

Relative quantification of proteasome activity by activity-based protein profiling and LC-MS/MS

(2013) Nan Li et al.   Nature Protocols

Advanced Proteomic Analyses Yield a Deep Catalog of Ubiquitylation Targets inArabidopsis

(2013) Do-Young Kim et al.   PLANT CELL

Pseudomonas syringae pv. syringae Uses Proteasome Inhibitor Syringolin A to Colonize from Wound Infection Sites

(2013) Johana C. Misas-Villamil et al.   PLoS Pathogens

Changes in 20S subunit composition are largely responsible for altered proteasomal activities in experimental autoimmune encephalomyelitis

(2012) Jianzheng Zheng et al.   JOURNAL OF NEUROCHEMISTRY

The tomato genome sequence provides insights into fleshy fruit evolution

(2012)   NATURE

Activity profiling of vacuolar processing enzymes reveals a role for VPE during oomycete infection

(2012) Johana C. Misas-Villamil et al.   PLANT JOURNAL

Post-Translational Regulation and Trafficking of the Granulin-Containing Protease RD21 of Arabidopsis thaliana

(2012) Christian Gu et al.   PLoS One

Ultra High Resolution Linear Ion Trap Orbitrap Mass Spectrometer (Orbitrap Elite) Facilitates Top Down LC MS/MS and Versatile Peptide Fragmentation Modes

(2011) Annette Michalski et al.   MOLECULAR & CELLULAR PROTEOMICS

Cross-talk between salicylic acid and NaCl-generated reactive oxygen species and nitric oxide in tomato during acclimation to high salinity

(2011) Katalin Gémes et al.   PHYSIOLOGIA PLANTARUM

Immunoproteasomes Preserve Protein Homeostasis upon Interferon-Induced Oxidative Stress

(2010) Ulrike Seifert et al.   CELL

Salicylic acid treatment via the rooting medium interferes with stomatal response, CO2 fixation rate and carbohydrate metabolism in tomato, and decreases harmful effects of subsequent salt stress

(2010) P. Poór et al.   PLANT BIOLOGY

Proteasome Activity Imaging and Profiling Characterizes Bacterial Effector Syringolin A

(2010) I. Kolodziejek et al.   PLANT PHYSIOLOGY

Salinity and programmed cell death: unravelling mechanisms for ion specific signalling

(2009) S. Shabala   JOURNAL OF EXPERIMENTAL BOTANY

The diversity of plant U-box E3 ubiquitin ligases: from upstream activators to downstream target substrates

(2009) D. Yee et al.   JOURNAL OF EXPERIMENTAL BOTANY

Diversity of Serine Hydrolase Activities of Unchallenged andBotrytis-infectedArabidopsis thaliana

(2009) Farnusch Kaschani et al.   MOLECULAR & CELLULAR PROTEOMICS

The Arabidopsis 26S Proteasome Subunit RPN1a is Required for Optimal Plant Growth and Stress Responses

(2009) Songhu Wang et al.   PLANT AND CELL PHYSIOLOGY

Proteasome activity profiling: a simple, robust and versatile method revealing subunit-selective inhibitors and cytoplasmic, defense-induced proteasome activities

(2009) Christian Gu et al.   PLANT JOURNAL

Short-term salinity stress in tobacco plants leads to the onset of animal-like PCD hallmarks in planta in contrast to long-term stress

(2009) Efthimios A. Andronis et al.   PLANTA

Activity-Based Protein Profiling: From Enzyme Chemistry to Proteomic Chemistry

(2008) Benjamin F. Cravatt et al.   Annual Review of Biochemistry

Cytochromecis released from coupled mitochondria of yeast en route to acetic acid-induced programmed cell death and can work as an electron donor and a ROS scavenger

(2008) Sergio Giannattasio et al.   FEBS LETTERS

A plant pathogen virulence factor inhibits the eukaryotic proteasome by a novel mechanism

(2008) Michael Groll et al.   NATURE

Arabidopsis PUB22 and PUB23 Are Homologous U-Box E3 Ubiquitin Ligases That Play Combinatory Roles in Response to Drought Stress

(2008) S. K. Cho et al.   PLANT CELL

Fungal Effector Protein AVR2 Targets Diversifying Defense-Related Cys Proteases of Tomato

(2008) M. Shabab et al.   PLANT CELL

Two-dimensional electrophoresis-based characterization of post-translational modifications of mammalian 20S proteasome complexes

(2008) Chenggong Zong et al.   PROTEOMICS

Structure, function and regulation of plant proteasomes

(2007) Jasmina Kurepa et al.   BIOCHIMIE

26S proteasome regulatory particle mutants have increased oxidative stress tolerance

(2007) Jasmina Kurepa et al.   PLANT JOURNAL