Methylation Sensitive Amplification Polymorphism Sequencing (MSAP-Seq)—A Method for High-Throughput Analysis of Differentially Methylated CCGG Sites in Plants with Large Genomes

Analysis of DNA methylation patterns associated with drought stress response in faba bean ( Vicia faba L.) using methylation-sensitive amplification polymorphism (MSAP)

(2017) Ghassen Abid et al.   ENVIRONMENTAL AND EXPERIMENTAL BOTANY

Laser Irradiation-Induced DNA Methylation Changes Are Heritable and Accompanied with Transpositional Activation of mPing in Rice

(2017) Siyuan Li et al.   Frontiers in Plant Science

Water-deficiency conditions differently modulate the methylome of roots and leaves in barley (Hordeum vulgareL.)

(2016) Karolina Chwialkowska et al.   JOURNAL OF EXPERIMENTAL BOTANY

Genetic and Epigenetic Changes in Oilseed Rape (Brassica napus L.) Extracted from Intergeneric Allopolyploid and Additions with Orychophragmus

(2016) Mayank Gautam et al.   Frontiers in Plant Science

Chilling-Mediated DNA Methylation Changes during Dormancy and Its Release Reveal the Importance of Epigenetic Regulation during Winter Dormancy in Apple (Malus x domestica Borkh.)

(2016) Gulshan Kumar et al.   PLoS One

DNA damage and genetic methylation changes caused by Cd inArabidopsis thalianaseedlings

(2015) Zhaoling Li et al.   ENVIRONMENTAL TOXICOLOGY AND CHEMISTRY

Epigenetic mechanisms of salt tolerance and heterosis in Upland cotton (Gossypium hirsutum L.) revealed by methylation-sensitive amplified polymorphism analysis

(2015) Baohua Wang et al.   EUPHYTICA

Epigenetic variation and environmental change: Fig. 1.

(2015) Peter Meyer   JOURNAL OF EXPERIMENTAL BOTANY

Crop Epigenomics: Identifying, Unlocking, and Harnessing Cryptic Variation in Crop Genomes

(2015) Lexiang Ji et al.   Molecular Plant

Ensembl 2016

(2015) Andrew Yates et al.   NUCLEIC ACIDS RESEARCH

Assessment of genetic and epigenetic changes in virus-free garlic (Allium sativum L.) plants obtained by meristem culture followed by in vitro propagation

(2015) Magalí Diana Gimenez et al.   PLANT CELL REPORTS

Radiation-Induced Epigenetic Bystander Effects Demonstrated inArabidopsis Thaliana

(2015) Wei Xu et al.   RADIATION RESEARCH

Transposable Elements Contribute to Activation of Maize Genes in Response to Abiotic Stress

(2015) Irina Makarevitch et al.   PLoS Genetics

Analysis of DNA methylation of perennial ryegrass under drought using the methylation-sensitive amplification polymorphism (MSAP) technique

(2014) Xiao-Mei Tang et al.   MOLECULAR GENETICS AND GENOMICS

The MET1b gene encoding a maintenance DNA methyltransferase is indispensable for normal development in rice

(2014) Takaki Yamauchi et al.   PLANT MOLECULAR BIOLOGY

Differential Methylation during Maize Leaf Growth Targets Developmentally Regulated Genes

(2014) J. Candaele et al.   PLANT PHYSIOLOGY

GC content evolution in coding regions of angiosperm genomes: a unifying hypothesis

(2014) Sylvain Glémin et al.   TRENDS IN GENETICS

The study of a barley epigenetic regulator, HvDME, in seed development and under drought

(2013) Aliki Kapazoglou et al.   BMC PLANT BIOLOGY

Use of MSAP Markers to Analyse the Effects of Salt Stress on DNA Methylation in Rapeseed (Brassica napus var. oleifera)

(2013) Gianpiero Marconi et al.   PLoS One

Vernalization and photoperiod-related changes in the DNA methylation state in winter and spring rapeseed

(2012) Justyna Guzy-Wrobelska et al.   ACTA PHYSIOLOGIAE PLANTARUM

CHH islands: de novo DNA methylation in near-gene chromatin regulation in maize

(2012) J. I. Gent et al.   GENOME RESEARCH

A physical, genetic and functional sequence assembly of the barley genome

(2012)   NATURE

Fast gapped-read alignment with Bowtie 2

(2012) Ben Langmead et al.   NATURE METHODS

High-throughput approaches for plant epigenomic studies

(2011) Robert J Schmitz et al.   CURRENT OPINION IN PLANT BIOLOGY

Drought-induced site-specific DNA methylation and its association with drought tolerance in rice (Oryza sativa L.)

(2010) Wen-Sheng Wang et al.   JOURNAL OF EXPERIMENTAL BOTANY

Conservation and divergence of methylation patterning in plants and animals

(2010) S. Feng et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

An operational definition of epigenetics

(2009) S. L. Berger et al.   GENES & DEVELOPMENT

Analysis of DNA methylation of maize in response to osmotic and salt stress based on methylation-sensitive amplified polymorphism

(2009) Ming-pu Tan   PLANT PHYSIOLOGY AND BIOCHEMISTRY

Highly Integrated Single-Base Resolution Maps of the Epigenome in Arabidopsis

(2008) Ryan Lister et al.   CELL

Shotgun bisulphite sequencing of the Arabidopsis genome reveals DNA methylation patterning

(2008) Shawn J. Cokus et al.   NATURE

Brassica oleracea displays a high level of DNA methylation polymorphism

(2007) Armel Salmon et al.   PLANT SCIENCE