Rice Seed Germination Underwater: Morpho-Physiological Responses and the Bases of Differential Expression of Alcoholic Fermentation Enzymes

RNA-Seq Analysis of Diverse Rice Genotypes to Identify the Genes Controlling Coleoptile Growth during Submerged Germination

(2017) Sheng-Kai Hsu et al.   Frontiers in Plant Science

Association Mapping Reveals Novel Genetic Loci Contributing to Flooding Tolerance during Germination in Indica Rice

(2017) Mengchen Zhang et al.   Frontiers in Plant Science

Transcriptional regulatory mechanism of alcohol dehydrogenase 1-deficient mutant of rice for cell survival under complete submergence

(2016) Bijayalaxmi Mohanty et al.   Rice

A little sugar goes a long way: The cell biology of O-GlcNAc

(2015) Michelle R. Bond et al.   JOURNAL OF CELL BIOLOGY

Mechanisms of growth and patterns of gene expression in oxygen-deprived rice coleoptiles

(2015) Reena Narsai et al.   PLANT JOURNAL

Genetic Mapping of Anaerobic Germination-Associated QTLs Controlling Coleoptile Elongation in Rice

(2015) Sheng-Kai Hsu et al.   Rice

A trehalose-6-phosphate phosphatase enhances anaerobic germination tolerance in rice

(2015) Tobias Kretzschmar et al.   Nature Plants

Rice alcohol dehydrogenase 1 promotes survival and has a major impact on carbohydrate metabolism in the embryo and endosperm when seeds are germinated in partially oxygenated water

(2014) Hirokazu Takahashi et al.   ANNALS OF BOTANY

QTL mapping for tolerance of anaerobic germination from IR64 and the aus landrace Nanhi using SNP genotyping

(2014) Miriam D. Baltazar et al.   EUPHYTICA

Global Analysis of Lysine Acetylation Suggests the Involvement of Protein Acetylation in Diverse Biological Processes in Rice (Oryza sativa)

(2014) Babi Ramesh Reddy Nallamilli et al.   PLoS One

Differences in responses to flooding by germinating seeds of two contrasting rice cultivars and two species of economically important grass weeds

(2014) Lucy P. Estioko et al.   AoB Plants

Quantitative proteomics reveals the effect of protein glycosylation in soybean root under flooding stress

(2014) Ghazala Mustafa et al.   Frontiers in Plant Science

Precision mapping of the human O-GalNAc glycoproteome through SimpleCell technology

(2013) Catharina Steentoft et al.   EMBO JOURNAL

QTL mapping and confirmation for tolerance of anaerobic conditions during germination derived from the rice landrace Ma-Zhan Red

(2013) Endang M. Septiningsih et al.   THEORETICAL AND APPLIED GENETICS

Tolerance of anaerobic conditions caused by flooding during germination and early growth in rice (Oryza sativa L.)

(2013) Berta Miro et al.   Frontiers in Plant Science

Patterns of cis-element enrichment reveal potential regulatory modules involved in the transcriptional regulation of anoxia response of japonica rice

(2012) Bijayalaxmi Mohanty et al.   GENE

Quantifying ATP turnover in anoxic coleoptiles of rice (Oryza sativa) demonstrates preferential allocation of energy to protein synthesis

(2012) Joshua M. Edwards et al.   JOURNAL OF EXPERIMENTAL BOTANY

NIH Image to ImageJ: 25 years of image analysis

(2012) Caroline A Schneider et al.   NATURE METHODS

Adaptation to flooding during emergence and seedling growth in rice and weeds, and implications for crop establishment

(2012) Abdelbagi M. Ismail et al.   AoB Plants

Cell division and cell elongation in the coleoptile of rice alcohol dehydrogenase 1-deficient mutant are reduced under complete submergence

(2011) Hirokazu Takahashi et al.   ANNALS OF BOTANY

Cross Talk Between O-GlcNAcylation and Phosphorylation: Roles in Signaling, Transcription, and Chronic Disease

(2011) Gerald W. Hart et al.   Annual Review of Biochemistry

Acetylation-dependent regulation of mitochondrial ALDH2 activation by SIRT3 mediates acute ethanol-induced eNOS activation

(2011) Li Xue et al.   FEBS LETTERS

Proteomic identification of differentially expressed proteins in the anoxic rice coleoptile

(2011) Irfan Sadiq et al.   JOURNAL OF PLANT PHYSIOLOGY

Differential Molecular Responses of Rice and Wheat Coleoptiles to Anoxia Reveal Novel Metabolic Adaptations in Amino Acid Metabolism for Tissue Tolerance

(2011) R. N. Shingaki-Wells et al.   PLANT PHYSIOLOGY

Seed pre-treatment in rice reduces damage, enhances carbohydrate mobilization and improves emergence and seedling establishment under flooded conditions

(2011) Evangelina S. Ella et al.   AoB Plants

O-GlcNAc protein modification in plants: Evolution and function

(2009) Neil E. Olszewski et al.   BIOCHIMICA ET BIOPHYSICA ACTA-GENERAL SUBJECTS

The Many Pathways of RNA Degradation

(2009) Jonathan Houseley et al.   CELL

Defining Core Metabolic and Transcriptomic Responses to Oxygen Availability in Rice Embryos and Young Seedlings

(2009) R. Narsai et al.   PLANT PHYSIOLOGY

Transcript and metabolite profiling of the adaptive response to mild decreases in oxygen concentration in the roots of arabidopsis plants

(2008) Joost T. van Dongen et al.   ANNALS OF BOTANY

Mechanisms associated with tolerance to flooding during germination and early seedling growth in rice (Oryza sativa)

(2008) Abdelbagi M. Ismail et al.   ANNALS OF BOTANY

Flooding Stress: Acclimations and Genetic Diversity

(2008) J. Bailey-Serres et al.   Annual Review of Plant Biology

Experimental Analysis of the Rice Mitochondrial Proteome, Its Biogenesis, and Heterogeneity

(2008) S. Huang et al.   PLANT PHYSIOLOGY

Regulation of Respiration and Fermentation to Control the Plant Internal Oxygen Concentration

(2008) A. Zabalza et al.   PLANT PHYSIOLOGY