Robust Inference of Genetic Exchange Communities from Microbial Genomes Using TF-IDF
Published 2017 View Full Article
- Home
- Publications
- Publication Search
- Publication Details
Title
Robust Inference of Genetic Exchange Communities from Microbial Genomes Using TF-IDF
Authors
Keywords
-
Journal
Frontiers in Microbiology
Volume 8, Issue -, Pages -
Publisher
Frontiers Media SA
Online
2017-01-19
DOI
10.3389/fmicb.2017.00021
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- Lower bounds on paraclique density
- (2016) Ronald D. Hagan et al. DISCRETE APPLIED MATHEMATICS
- Alignment-free microbial phylogenomics under scenarios of sequence divergence, genome rearrangement and lateral genetic transfer
- (2016) Guillaume Bernard et al. Scientific Reports
- A novel alignment-free method for detection of lateral genetic transfer based on TF-IDF
- (2016) Yingnan Cong et al. Scientific Reports
- Exploring lateral genetic transfer among microbial genomes using TF-IDF
- (2016) Yingnan Cong et al. Scientific Reports
- The Turbulent Network Dynamics of Microbial Evolution and the Statistical Tree of Life
- (2015) Eugene V. Koonin JOURNAL OF MOLECULAR EVOLUTION
- Diversification of bacterial genome content through distinct mechanisms over different timescales
- (2014) Nicholas J. Croucher et al. Nature Communications
- Inferring phylogenies of evolving sequences without multiple sequence alignment
- (2014) Cheong Xin Chan et al. Scientific Reports
- Networks: expanding evolutionary thinking
- (2013) Eric Bapteste et al. TRENDS IN GENETICS
- Phylogeny rather than ecology or lifestyle biases the construction of Escherichia coli-Shigella genetic exchange communities
- (2012) E. Skippington et al. Open Biology
- The genetic integrity of bacterial species: the core genome and the accessory genome, two different stories
- (2012) Bo Segerman Frontiers in Cellular and Infection Microbiology
- How stands the Tree of Life a century and a half after The Origin?
- (2011) Maureen A O'Malley et al. Biology Direct
- Directed networks reveal genomic barriers and DNA repair bypasses to lateral gene transfer among prokaryotes
- (2011) O. Popa et al. GENOME RESEARCH
- The horizontal flow of the plasmid resistome: clues from inter-generic similarity networks
- (2010) Marco Fondi et al. ENVIRONMENTAL MICROBIOLOGY
- The Tree and Net Components of Prokaryote Evolution
- (2010) Pere Puigbò et al. Genome Biology and Evolution
- Lateral Transfer of Genes and Gene Fragments in Prokaryotes
- (2009) Cheong Xin Chan et al. Genome Biology and Evolution
- Lateral genetic transfer: open issues
- (2009) M. A. Ragan et al. PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES
- Getting a better picture of microbial evolution en route to a network of genomes
- (2009) T. Dagan et al. PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES
- The practice of classification and the theory of evolution, and what the demise of Charles Darwin's tree of life hypothesis means for both of them
- (2009) W. F. Doolittle PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES
- Are Protein Domains Modules of Lateral Genetic Transfer?
- (2009) Cheong Xin Chan et al. PLoS One
- Network analyses structure genetic diversity in independent genetic worlds
- (2009) S. Halary et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Assigning Escherichia coli strains to phylogenetic groups: multi-locus sequence typing versus the PCR triplex method
- (2008) David M. Gordon et al. ENVIRONMENTAL MICROBIOLOGY
- Reticulate Representation of Evolutionary and Functional Relationships between Phage Genomes
- (2008) G. Lima-Mendez et al. MOLECULAR BIOLOGY AND EVOLUTION
- Modular networks and cumulative impact of lateral transfer in prokaryote genome evolution
- (2008) T. Dagan et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
Publish scientific posters with Peeref
Peeref publishes scientific posters from all research disciplines. Our Diamond Open Access policy means free access to content and no publication fees for authors.
Learn MoreAdd your recorded webinar
Do you already have a recorded webinar? Grow your audience and get more views by easily listing your recording on Peeref.
Upload Now