Marine Bivalve Mollusks As Possible Indicators of Multidrug-Resistant Escherichia coli and Other Species of the Enterobacteriaceae Family

“Population structure of Drug-Susceptible, -Resistant and ESBL-producing Escherichia coli from Community-Acquired Urinary Tract Infections”

(2016) Frederik Boëtius Hertz et al.   BMC MICROBIOLOGY

The species accuracy of the Most Probable Number (MPN) European Union reference method for enumeration of Escherichia coli in marine bivalves

(2016) Didrik Hjertaker Grevskott et al.   JOURNAL OF MICROBIOLOGICAL METHODS

Assessment of species and antimicrobial resistance among Enterobacteriaceae isolated from mallard duck faeces

(2015) Jayaseelan Murugaiyan et al.   ENVIRONMENTAL MONITORING AND ASSESSMENT

Antibiotic-resistant ST38, ST131 and ST405 strains are the leading uropathogenicEscherichia coliclones in Riyadh, Saudi Arabia

(2015) Majed F. Alghoribi et al.   JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY

Rapid and Easy In Silico Serotyping of Escherichia coli Isolates by Use of Whole-Genome Sequencing Data

(2015) Katrine G. Joensen et al.   JOURNAL OF CLINICAL MICROBIOLOGY

Prevalence and Characterization of Shiga Toxin-Producing and Enteropathogenic Escherichia coli in Shellfish-Harvesting Areas and Their Watersheds

(2015) Charlotte Balière et al.   Frontiers in Microbiology

Gut Microbiome of an 11th Century A.D. Pre-Columbian Andean Mummy

(2015) Tasha M. Santiago-Rodriguez et al.   PLoS One

Trimmomatic: a flexible trimmer for Illumina sequence data

(2014) Anthony M. Bolger et al.   BIOINFORMATICS

The contribution of Escherichia coli from human and animal sources to the integron gene pool in coastal waters

(2014) Alexandra Moura et al.   Frontiers in Microbiology

Seawater is a reservoir of multi-resistant Escherichia coli, including strains hosting plasmid-mediated quinolones resistance and extended-spectrum beta-lactamases genes

(2014) Marta S. Alves et al.   Frontiers in Microbiology

Age-related differences in symptoms, diagnosis and prognosis of bacteremia

(2013) Astrid L Wester et al.   BMC INFECTIOUS DISEASES

Development of the EUCAST disk diffusion antimicrobial susceptibility testing method and its implementation in routine microbiology laboratories

(2013) E. Matuschek et al.   CLINICAL MICROBIOLOGY AND INFECTION

Environmental Influences on Faecal Indicator Organisms in Coastal Waters and Their Accumulation in Bivalve Shellfish

(2013) Carlos J. A. Campos et al.   Estuaries and Coasts

The role of the natural environment in the emergence of antibiotic resistance in Gram-negative bacteria

(2013) Elizabeth MH Wellington et al.   LANCET INFECTIOUS DISEASES

Evolutionary consequences of antibiotic use for the resistome, mobilome and microbial pangenome

(2013) Michael R. Gillings   Frontiers in Microbiology

The human microbiome as a reservoir of antimicrobial resistance

(2013) John Penders et al.   Frontiers in Microbiology

Clonal Composition and Community Clustering of Drug-Susceptible and -Resistant Escherichia coli Isolates from Bloodstream Infections

(2012) Sheila Adams-Sapper et al.   ANTIMICROBIAL AGENTS AND CHEMOTHERAPY

Identification of acquired antimicrobial resistance genes

(2012) E. Zankari et al.   JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY

Multilocus Sequence Typing of Total-Genome-Sequenced Bacteria

(2012) M. V. Larsen et al.   JOURNAL OF CLINICAL MICROBIOLOGY

SPAdes: A New Genome Assembly Algorithm and Its Applications to Single-Cell Sequencing

(2012) Anton Bankevich et al.   JOURNAL OF COMPUTATIONAL BIOLOGY

Gut inflammation can boost horizontal gene transfer between pathogenic and commensal Enterobacteriaceae

(2012) B. Stecher et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Urban wastewater treatment plants as hotspots for the release of antibiotics in the environment: A review

(2012) I. Michael et al.   WATER RESEARCH

CTX-M Enzymes: Origin and Diffusion

(2012) Rafael Cantón et al.   Frontiers in Microbiology

Multidrug-resistant, extensively drug-resistant and pandrug-resistant bacteria: an international expert proposal for interim standard definitions for acquired resistance

(2011) A.-P. Magiorakos et al.   CLINICAL MICROBIOLOGY AND INFECTION

Antibiotic resistance gene spread due to manure application on agricultural fields

(2011) Holger Heuer et al.   CURRENT OPINION IN MICROBIOLOGY

Antibiotics and the resistant microbiome

(2011) Morten OA Sommer et al.   CURRENT OPINION IN MICROBIOLOGY

Variability in particle retention efficiency by the mussel Mytilus edulis

(2011) Tore Strohmeier et al.   JOURNAL OF EXPERIMENTAL MARINE BIOLOGY AND ECOLOGY

Rapid and high resolution genotyping of all Escherichia coli serotypes using 10 genomic repeat-containing loci

(2011) Inger Løbersli et al.   JOURNAL OF MICROBIOLOGICAL METHODS

Antibiotic resistance is ancient

(2011) Vanessa M. D’Costa et al.   NATURE

Aquatic systems: maintaining, mixing and mobilising antimicrobial resistance?

(2011) Nick G.H. Taylor et al.   TRENDS IN ECOLOGY & EVOLUTION

Extended-Spectrum Beta-Lactamases Producing E. coli in Wildlife, yet Another Form of Environmental Pollution?

(2011) Sebastian Guenther et al.   Frontiers in Microbiology

Antibiotic resistance in the environment: a link to the clinic?

(2010) Gerard D Wright   CURRENT OPINION IN MICROBIOLOGY

Survival of Escherichia coli in the environment: fundamental and public health aspects

(2010) Jan Dirk van Elsas et al.   ISME Journal

Origins and Evolution of Antibiotic Resistance

(2010) J. Davies et al.   MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS

Environmental pollution by antibiotics and by antibiotic resistance determinants

(2009) Jose Luis Martinez   ENVIRONMENTAL POLLUTION

Effect of long-term trimethoprim/sulfamethoxazole treatment on resistance and integron prevalence in the intestinal flora: a randomized, double-blind, placebo-controlled trial in children

(2009) E. L. van der Veen et al.   JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY

Wastewater bacterial communities bring together broad-host range plasmids, integrons and a wide diversity of uncharacterized gene cassettes

(2009) Alexandra Moura et al.   RESEARCH IN MICROBIOLOGY

Prevalence and spread of extended-spectrum β-lactamase-producing Enterobacteriaceae in Europe

(2008) R. Cantón et al.   CLINICAL MICROBIOLOGY AND INFECTION

Antibiotics and antibiotic resistance in water environments

(2008) Fernando Baquero et al.   CURRENT OPINION IN BIOTECHNOLOGY

Victims or vectors: a survey of marine vertebrate zoonoses from coastal waters of the Northwest Atlantic

(2008) AL Bogomolni et al.   DISEASES OF AQUATIC ORGANISMS