Different Types of Diatom-Derived Extracellular Polymeric Substances Drive Changes in Heterotrophic Bacterial Communities from Intertidal Sediments

Biofilm and Planktonic Bacterial and Fungal Communities Transforming High-Molecular-Weight Polycyclic Aromatic Hydrocarbons

(2016) Benjamin D. Folwell et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Diverse, uncultivated bacteria and archaea underlying the cycling of dissolved protein in the ocean

(2016) William D Orsi et al.   ISME Journal

Patterns and drivers of carbohydrate budgets in ice algal assemblages from first year Arctic sea ice

(2016) Shazia N. Aslam et al.   LIMNOLOGY AND OCEANOGRAPHY

Dynamics of Inorganic Nutrients in Intertidal Sediments: Porewater, Exchangeable, and Intracellular Pools

(2016) Emilio Garcia-Robledo et al.   Frontiers in Microbiology

Expanding the World of Marine Bacterial and Archaeal Clades

(2016) Pelin Yilmaz et al.   Frontiers in Microbiology

Microphytobenthic extracellular polymeric substances (EPS) in intertidal sediments fuel both generalist and specialist EPS-degrading bacteria

(2016) Joe D. Taylor et al.   LIMNOLOGY AND OCEANOGRAPHY

Stable-Isotope Probing Identifies Uncultured Planctomycetes as Primary Degraders of a Complex Heteropolysaccharide in Soil

(2015) Xiaoqing Wang et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Seasonal variations of the composition of microbial biofilms in sandy tidal flats: Focus of fatty acids, pigments and exopolymers

(2015) Claire Passarelli et al.   ESTUARINE COASTAL AND SHELF SCIENCE

Impact of sediment grain-size and biofilm age on epipelic microphytobenthos resuspension

(2015) Martin Ubertini et al.   JOURNAL OF EXPERIMENTAL MARINE BIOLOGY AND ECOLOGY

Origin, dynamics, and implications of extracellular DNA pools in marine sediments

(2015) Andrea Torti et al.   Marine Genomics

Potential contribution of microalgal intracellular phosphorus to phosphorus distribution in tidal flat sediments during winter

(2015) Akira Yamaguchi et al.   Plankton & Benthos Research

Verrucomicrobia Are Candidates for Polysaccharide-Degrading Bacterioplankton in an Arctic Fjord of Svalbard

(2014) Z. Cardman et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Protection of cells from salinity stress by extracellular polymeric substances in diatom biofilms

(2014) Deborah J. Steele et al.   BIOFOULING

STAMP: statistical analysis of taxonomic and functional profiles

(2014) Donovan H. Parks et al.   BIOINFORMATICS

Tracing carbon flow from microphytobenthos to major bacterial groups in an intertidal marine sediment by using an in situ13C pulse-chase method

(2014) Tetsuro Miyatake et al.   LIMNOLOGY AND OCEANOGRAPHY

A theoretical analysis of how strain-specific viruses can control microbial species diversity

(2014) T. F. Thingstad et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Coastal Zone Ecosystem Services: From science to values and decision making; a case study

(2014) T. Luisetti et al.   SCIENCE OF THE TOTAL ENVIRONMENT

Quantifying the degradation of organic matter in marine sediments: A review and synthesis

(2013) Sandra Arndt et al.   EARTH-SCIENCE REVIEWS

Phylogenetic and structural response of heterotrophic bacteria to dissolved organic matter of different chemical composition in a continuous culture study

(2013) M. Landa et al.   ENVIRONMENTAL MICROBIOLOGY

The value of carbon sequestration and storage in coastal habitats

(2013) N.J. Beaumont et al.   ESTUARINE COASTAL AND SHELF SCIENCE

Differences between aerobic and anaerobic degradation of microphytobenthic biofilm-derived organic matter within intertidal sediments

(2013) Boyd A. McKew et al.   FEMS MICROBIOLOGY ECOLOGY

Seasonal dynamics of extracellular polymeric substances (EPS) in surface sediments of a diatom-dominated intertidal mudflat (Marennes–Oléron, France)

(2013) Guillaume Pierre et al.   JOURNAL OF SEA RESEARCH

SAR11 viruses and defensive host strains

(2013) Selina Våge et al.   NATURE

Role of Diatoms in the Spatial-Temporal Distribution of Intracellular Nitrate in Intertidal Sediment

(2013) Peter Stief et al.   PLoS One

Metagenomic De Novo Assembly of an Aquatic Representative of the Verrucomicrobial Class Spartobacteria

(2013) D. P. R. Herlemann et al.   mBio

Free-living and aggregate-associated Planctomycetes in the Black Sea

(2012) Clara A. Fuchsman et al.   FEMS MICROBIOLOGY ECOLOGY

Algoriphagus machipongonensis sp. nov., co-isolated with a colonial choanoflagellate

(2012) R. A. Alegado et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

Global distribution and diversity of marine Verrucomicrobia

(2012) Sara Freitas et al.   ISME Journal

Expression of sulfatases in Rhodopirellula baltica and the diversity of sulfatases in the genus Rhodopirellula

(2012) Carl-Eric Wegner et al.   Marine Genomics

Capturing Single Cell Genomes of Active Polysaccharide Degraders: An Unexpected Contribution of Verrucomicrobia

(2012) Manuel Martinez-Garcia et al.   PLoS One

Planctomycetes diversity associated with macroalgae

(2011) Olga Maria Lage et al.   FEMS MICROBIOLOGY ECOLOGY

Microbial Extracellular Enzymes and the Marine Carbon Cycle

(2010) Carol Arnosti   Annual Review of Marine Science

Production and enzymatic hydrolysis of carbohydrates in intertidal sediment

(2010) DCO Thornton et al.   AQUATIC MICROBIAL ECOLOGY

Identifying biologically relevant differences between metagenomic communities

(2010) Donovan H. Parks et al.   BIOINFORMATICS

Resistance and resilience of benthic biofilm communities from a temperate saltmarsh to desiccation and rewetting

(2010) Boyd A McKew et al.   ISME Journal

Composition, production, and loss of carbohydrates in subtropical shallow subtidal sandy sediments: Rapid processing and long-term retention revealed by 13 C-labeling

(2010) Joanne M. Oakes et al.   LIMNOLOGY AND OCEANOGRAPHY

Freeze-lysable inorganic nutrients in intertidal sediments: dependence on microphytobenthos abundance

(2010) E García-Robledo et al.   MARINE ECOLOGY PROGRESS SERIES

Distribution and composition of dissolved extracellular polymeric substances (EPS) in Antarctic sea ice

(2010) GJC Underwood et al.   MARINE ECOLOGY PROGRESS SERIES

Indirect interactions in the microbial world: specificities and similarities to plant–insect systems

(2010) Takeshi Miki et al.   POPULATION ECOLOGY

Significance of diatom-derived polymers in carbon flow dynamics within estuarine biofilms determined through isotopic enrichment

(2009) BJ Bellinger et al.   AQUATIC MICROBIAL ECOLOGY

Characterization of marine isoprene-degrading communities

(2009) Laura Acuña Alvarez et al.   ENVIRONMENTAL MICROBIOLOGY

Description of Persicirhabdus sediminis gen. nov., sp. nov., Roseibacillus ishigakijimensis gen. nov., sp. nov., Roseibacillus ponti sp. nov., Roseibacillus persicicus sp. nov., Luteolibacter pohnpeiensis gen. nov., sp. nov. and Luteolibacter algae sp. nov., six marine members of the phylum 'Verrucomicrobia', and emended descriptions of the class Verrucomicrobiae, the order Verrucomicrobiales and the family Verrucomicrobiaceae

(2008) J. Yoon et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

Dynamics and compositional changes in extracellular carbohydrates in estuarine sediments during degradation

(2008) T Hofmann et al.   MARINE ECOLOGY PROGRESS SERIES