The Biogeographical Distribution of Benthic Roseobacter Group Members along a Pacific Transect Is Structured by Nutrient Availability within the Sediments and Primary Production in Different Oceanic Provinces

The Effects of Cropping Regimes on Fungal and Bacterial Communities of Wheat and Faba Bean in a Greenhouse Pot Experiment Differ between Plant Species and Compartment

(2017) Sandra Granzow et al.   Frontiers in Microbiology

Ecological Genomics of the Uncultivated Marine Roseobacter Lineage CHAB-I-5

(2016) Yao Zhang et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Biogeography and environmental genomics of the Roseobacter-affiliated pelagic CHAB-I-5 lineage

(2016) Sara Billerbeck et al.   Nature Microbiology

The green impact: bacterioplankton response toward a phytoplankton spring bloom in the southern North Sea assessed by comparative metagenomic and metatranscriptomic approaches

(2015) Bernd Wemheuer et al.   Frontiers in Microbiology

Trimmomatic: a flexible trimmer for Illumina sequence data

(2014) Anthony M. Bolger et al.   BIOINFORMATICS

Boseongicola aestuarii gen. nov., sp. nov., isolated from a tidal flat sediment

(2014) S. Park et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

High virus-to-cell ratios indicate ongoing production of viruses in deep subsurface sediments

(2014) Tim Engelhardt et al.   ISME Journal

Determination of nitrate plus nitrite in small volume marine water samples using vanadium(III)chloride as a reduction agent

(2014) Bernhard Schnetger et al.   MARINE CHEMISTRY

Evolutionary Ecology of the Marine Roseobacter Clade

(2014) Haiwei Luo et al.   MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS

Genome-scale data suggest reclassifications in the Leisingera-Phaeobacter cluster including proposals for Sedimentitalea gen. nov. and Pseudophaeobacter gen. nov.

(2014) Sven Breider et al.   Frontiers in Microbiology

Meta-Analysis of Quantification Methods Shows that Archaea and Bacteria Have Similar Abundances in the Subseafloor

(2013) Karen G. Lloyd et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Impact of a phytoplankton bloom on the diversity of the active bacterial community in the southern North Sea as revealed by metatranscriptomic approaches

(2013) Bernd Wemheuer et al.   FEMS MICROBIOLOGY ECOLOGY

Establishment of euxinic conditions in the Holocene Black Sea

(2013) Sebastian Eckert et al.   GEOLOGY

Associating microbiome composition with environmental covariates using generalized UniFrac distances

(2012) Jun Chen et al.   BIOINFORMATICS

Loktanella cinnabarina sp. nov., isolated from a deep subseafloor sediment, and emended description of the genus Loktanella

(2012) T. Tsubouchi et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

Roseobacter clade bacteria are abundant in coastal sediments and encode a novel combination of sulfur oxidation genes

(2012) Sabine Lenk et al.   ISME Journal

Evaluation of general 16S ribosomal RNA gene PCR primers for classical and next-generation sequencing-based diversity studies

(2012) Anna Klindworth et al.   NUCLEIC ACIDS RESEARCH

Global distribution of microbial abundance and biomass in subseafloor sediment

(2012) J. Kallmeyer et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Aerobic Microbial Respiration in 86-Million-Year-Old Deep-Sea Red Clay

(2012) H. Roy et al.   SCIENCE

Differing Growth Responses of Major Phylogenetic Groups of Marine Bacteria to Natural Phytoplankton Blooms in the Western North Pacific Ocean

(2011) Yuya Tada et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Coupled organic and inorganic carbon cycling in the deep subseafloor sediment of the northeastern Bering Sea Slope (IODP Exp. 323)

(2011) Laura M. Wehrmann et al.   CHEMICAL GEOLOGY

Identifying fermenting bacteria in anoxic tidal-flat sediments by a combination of microcalorimetry and ribosome-based stable-isotope probing

(2011) Jutta Graue et al.   FEMS MICROBIOLOGY ECOLOGY

Degradation of cyanobacterial biomass in anoxic tidal-flat sediments: a microcosm study of metabolic processes and community changes

(2011) Jutta Graue et al.   ISME Journal

Search and clustering orders of magnitude faster than BLAST

(2010) Robert C. Edgar   BIOINFORMATICS

Distribution of Roseobacter RCA and SAR11 lineages in the North Sea and characteristics of an abundant RCA isolate

(2010) Helge-Ansgar Giebel et al.   ISME Journal

Genome characteristics of a generalist marine bacterial lineage

(2010) Ryan J Newton et al.   ISME Journal

QIIME allows analysis of high-throughput community sequencing data

(2010) J Gregory Caporaso et al.   NATURE METHODS

Distribution ofRoseobacterRCA and SAR11 lineages and distinct bacterial communities from the subtropics to the Southern Ocean

(2009) Helge-Ansgar Giebel et al.   ENVIRONMENTAL MICROBIOLOGY

Leisingera nanhaiensis sp. nov., isolated from marine sediment

(2009) F. Sun et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

Discriminative detection and enumeration of microbial life in marine subsurface sediments

(2009) Yuki Morono et al.   ISME Journal

Characterization of Nitrifying, Denitrifying, and Overall Bacterial Communities in Permeable Marine Sediments of the Northeastern Gulf of Mexico

(2008) H. J. Mills et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

The Ribosomal Database Project: improved alignments and new tools for rRNA analysis

(2008) J. R. Cole et al.   NUCLEIC ACIDS RESEARCH