Severe infections emerge from commensal bacteria by adaptive evolution
Published 2017 View Full Article
- Home
- Publications
- Publication Search
- Publication Details
Title
Severe infections emerge from commensal bacteria by adaptive evolution
Authors
Keywords
-
Journal
eLife
Volume 6, Issue -, Pages -
Publisher
eLife Sciences Organisation, Ltd.
Online
2017-12-20
DOI
10.7554/elife.30637
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- Whole-Genome Sequencing Reveals the Contribution of Long-Term Carriers in Staphylococcus aureus Outbreak Investigation
- (2017) N. C. Gordon et al. JOURNAL OF CLINICAL MICROBIOLOGY
- Global, regional, and national life expectancy, all-cause mortality, and cause-specific mortality for 249 causes of death, 1980–2015: a systematic analysis for the Global Burden of Disease Study 2015
- (2016) Haidong Wang et al. LANCET
- Within-host evolution of bacterial pathogens
- (2016) Xavier Didelot et al. NATURE REVIEWS MICROBIOLOGY
- Natural mutations in aStaphylococcus aureusvirulence regulator attenuate cytotoxicity but permit bacteremia and abscess formation
- (2016) Sudip Das et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Cospeciation of gut microbiota with hominids
- (2016) A. H. Moeller et al. SCIENCE
- Identifying lineage effects when controlling for population structure improves power in bacterial association studies
- (2016) Sarah G. Earle et al. Nature Microbiology
- The advent of genome-wide association studies for bacteria
- (2015) Peter E Chen et al. CURRENT OPINION IN MICROBIOLOGY
- KEGG as a reference resource for gene and protein annotation
- (2015) Minoru Kanehisa et al. NUCLEIC ACIDS RESEARCH
- The MetaCyc database of metabolic pathways and enzymes and the BioCyc collection of pathway/genome databases
- (2015) Ron Caspi et al. NUCLEIC ACIDS RESEARCH
- Evolutionary Trade-Offs Underlie the Multi-faceted Virulence of Staphylococcus aureus
- (2015) Maisem Laabei et al. PLOS BIOLOGY
- ClonalFrameML: Efficient Inference of Recombination in Whole Bacterial Genomes
- (2015) Xavier Didelot et al. PLoS Computational Biology
- RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies
- (2014) Alexandros Stamatakis BIOINFORMATICS
- Predicting the virulence of MRSA from its genome sequence
- (2014) M. Laabei et al. GENOME RESEARCH
- Prediction of Staphylococcus aureus Antimicrobial Resistance by Whole-Genome Sequencing
- (2014) N. C. Gordon et al. JOURNAL OF CLINICAL MICROBIOLOGY
- Convergent evolution and adaptation of Pseudomonas aeruginosa within patients with cystic fibrosis
- (2014) Rasmus Lykke Marvig et al. NATURE GENETICS
- Staphylococcus aureus secretes a unique class of neutrophil serine protease inhibitors
- (2014) D. A. C. Stapels et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- What role does the quorum-sensing accessory gene regulator system play during Staphylococcus aureus bacteremia?
- (2014) Kimberley L. Painter et al. TRENDS IN MICROBIOLOGY
- Environmental Heterogeneity Drives Within-Host Diversification and Evolution of Pseudomonas aeruginosa
- (2014) T. Markussen et al. mBio
- Mobile elements drive recombination hotspots in the core genome of Staphylococcus aureus
- (2014) Richard G. Everitt et al. Nature Communications
- What is a pathogen? Toward a process view of host-parasite interactions
- (2014) Pierre-Olivier Méthot et al. Virulence
- Comprehensive Identification of Single Nucleotide Polymorphisms Associated with Beta-lactam Resistance within Pneumococcal Mosaic Genes
- (2014) Claire Chewapreecha et al. PLoS Genetics
- A genomic portrait of the emergence, evolution, and global spread of a methicillin-resistant Staphylococcus aureus pandemic
- (2013) M. T. G. Holden et al. GENOME RESEARCH
- Cooperation, Quorum Sensing, and Evolution of Virulence in Staphylococcus aureus
- (2013) Eric J. G. Pollitt et al. INFECTION AND IMMUNITY
- Genetic variation of a bacterial pathogen within individuals with cystic fibrosis provides a record of selective pressures
- (2013) Tami D Lieberman et al. NATURE GENETICS
- Adhesion, invasion and evasion: the many functions of the surface proteins of Staphylococcus aureus
- (2013) Timothy J. Foster et al. NATURE REVIEWS MICROBIOLOGY
- Within-Host Evolution of Staphylococcus aureus during Asymptomatic Carriage
- (2013) Tanya Golubchik et al. PLoS One
- Genome-wide association study identifies vitamin B5 biosynthesis as a host specificity factor in Campylobacter
- (2013) S. K. Sheppard et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Genome Analysis of a Transmissible Lineage of Pseudomonas aeruginosa Reveals Pathoadaptive Mutations and Distinct Evolutionary Paths of Hypermutators
- (2013) Rasmus Lykke Marvig et al. PLoS Genetics
- Accurate extension of multiple sequence alignments using a phylogeny-aware graph algorithm
- (2012) Ari Löytynoja et al. BIOINFORMATICS
- A privileged intraphagocyte niche is responsible for disseminated infection ofStaphylococcus aureusin a zebrafish model
- (2012) Tomasz K. Prajsnar et al. CELLULAR MICROBIOLOGY
- Nasal Carriage as a Source of agr-Defective Staphylococcus aureus Bacteremia
- (2012) Davida S. Smyth et al. JOURNAL OF INFECTIOUS DISEASES
- De novo assembly and genotyping of variants using colored de Bruijn graphs
- (2012) Zamin Iqbal et al. NATURE GENETICS
- Evolutionary dynamics of Staphylococcus aureus during progression from carriage to disease
- (2012) B. C. Young et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Evolution of virulence in opportunistic pathogens: generalism, plasticity, and control
- (2012) Sam P. Brown et al. TRENDS IN MICROBIOLOGY
- Microevolutionary analysis of Clostridium difficile genomes to investigate transmission
- (2012) Xavier Didelot et al. GENOME BIOLOGY
- Rsp Inhibits Attachment and Biofilm Formation by Repressing fnbA in Staphylococcus aureus MW2
- (2011) M. G. Lei et al. JOURNAL OF BACTERIOLOGY
- Parallel bacterial evolution within multiple patients identifies candidate pathogenicity genes
- (2011) Tami D Lieberman et al. NATURE GENETICS
- GeneDB--an annotation database for pathogens
- (2011) F. J. Logan-Klumpler et al. NUCLEIC ACIDS RESEARCH
- A Population Genetics-Phylogenetics Approach to Inferring Natural Selection in Coding Sequences
- (2011) Daniel J. Wilson et al. PLoS Genetics
- Evolution of Multidrug Resistance during Staphylococcus aureus Infection Involves Mutation of the Essential Two Component Regulator WalKR
- (2011) Benjamin P. Howden et al. PLoS Pathogens
- Microbial Virulence as an Emergent Property: Consequences and Opportunities
- (2011) Arturo Casadevall et al. PLoS Pathogens
- Whole genome analysis of a livestock-associated methicillin-resistant Staphylococcus aureus ST398 isolate from a case of human endocarditis
- (2010) Maarten J Schijffelen et al. BMC GENOMICS
- Evolutionary Genomics of Staphylococcus aureus Reveals Insights into the Origin and Molecular Basis of Ruminant Host Adaptation
- (2010) Caitriona M. Guinane et al. Genome Biology and Evolution
- Stampy: A statistical algorithm for sensitive and fast mapping of Illumina sequence reads
- (2010) G. Lunter et al. GENOME RESEARCH
- Complete Genome Sequence of Staphylococcus aureus Strain JKD6159, a Unique Australian Clone of ST93-IV Community Methicillin-Resistant Staphylococcus aureus
- (2010) K. Chua et al. JOURNAL OF BACTERIOLOGY
- Mutations inagrDo Not Persist in Natural Populations of Methicillin‐ResistantStaphylococcus aureus
- (2010) Bo Shopsin et al. JOURNAL OF INFECTIOUS DISEASES
- Genome-Wide Significance Levels and Weighted Hypothesis Testing
- (2010) Kathryn Roeder et al. STATISTICAL SCIENCE
- Two Novel Point Mutations in Clinical Staphylococcus aureus Reduce Linezolid Susceptibility and Switch on the Stringent Response to Promote Persistent Infection
- (2010) Wei Gao et al. PLoS Pathogens
- Transcriptome analysis of the responses of Staphylococcus aureus to antimicrobial peptides and characterization of the roles of vraDE and vraSR in antimicrobial resistance
- (2009) Milla Pietiäinen et al. BMC GENOMICS
- Body site colonization in patients with community-associated methicillin-resistant Staphylococcus aureus and other types of S. aureus skin infections
- (2009) E.S. Yang et al. CLINICAL MICROBIOLOGY AND INFECTION
- Genome Sequence of a Recently Emerged, Highly Transmissible, Multi-Antibiotic- and Antiseptic-Resistant Variant of Methicillin-Resistant Staphylococcus aureus, Sequence Type 239 (TW)
- (2009) M. T. G. Holden et al. JOURNAL OF BACTERIOLOGY
- Accessory Gene Regulator Dysfunction: An Advantage forStaphylococcus aureusin Health‐Care Settings?
- (2009) George Sakoulas et al. JOURNAL OF INFECTIOUS DISEASES
- Recent human-to-poultry host jump, adaptation, and pandemic spread of Staphylococcus aureus
- (2009) B. V. Lowder et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Quorum Sensing in Staphylococci
- (2008) Richard P. Novick et al. Annual Review of Genetics
- Different bacterial gene expression patterns and attenuated host immune responses are associated with the evolution of low-level vancomycin resistance during persistent methicillin-resistant Staphylococcus aureus bacteraemia
- (2008) Benjamin P Howden et al. BMC MICROBIOLOGY
- Velvet: Algorithms for de novo short read assembly using de Bruijn graphs
- (2008) D. R. Zerbino et al. GENOME RESEARCH
- Genetic changes that correlate with the pine-oil disinfectant-reduced susceptibility mechanism ofStaphylococcus aureus
- (2008) R. Lamichhane-Khadka et al. JOURNAL OF APPLIED MICROBIOLOGY
- agr function in clinical Staphylococcus aureus isolates
- (2008) K. E. Traber et al. MICROBIOLOGY-SGM
Publish scientific posters with Peeref
Peeref publishes scientific posters from all research disciplines. Our Diamond Open Access policy means free access to content and no publication fees for authors.
Learn MoreBecome a Peeref-certified reviewer
The Peeref Institute provides free reviewer training that teaches the core competencies of the academic peer review process.
Get Started