MicroCT-based phenomics in the zebrafish skeleton reveals virtues of deep phenotyping in a distributed organ system

Bone Material Properties in Osteogenesis Imperfecta

(2016) Nick Bishop   JOURNAL OF BONE AND MINERAL RESEARCH

Loss of Type I Collagen Telopeptide Lysyl Hydroxylation Causes Musculoskeletal Abnormalities in a Zebrafish Model of Bruck Syndrome

(2016) Charlotte Gistelinck et al.   JOURNAL OF BONE AND MINERAL RESEARCH

High-Throughput, Multi-Image Cryohistology of Mineralized Tissues

(2016) Nathaniel A. Dyment et al.   Jove-Journal of Visualized Experiments

High-throughput phenotyping and genetic linkage of cortical bone microstructure in the mouse

(2015) Kevin S Mader et al.   BMC GENOMICS

Fully-automated, high-throughput micro-computed tomography analysis of body composition enables therapeutic efficacy monitoring in preclinical models

(2015) S K Wyatt et al.   INTERNATIONAL JOURNAL OF OBESITY

Rapid reverse genetic screening using CRISPR in zebrafish

(2015) Arish N Shah et al.   NATURE METHODS

Fully Automatic Localization and Segmentation of 3D Vertebral Bodies from CT/MR Images via a Learning-Based Method

(2015) Chengwen Chu et al.   PLoS One

Kinesin family member 6 (kif6) is necessary for spine development in zebrafish

(2014) Jillian G. Buchan et al.   DEVELOPMENTAL DYNAMICS

Botulinum Toxin Induces Muscle Paralysis and Inhibits Bone Regeneration in Zebrafish

(2014) Anthony M Recidoro et al.   JOURNAL OF BONE AND MINERAL RESEARCH

Thyroid hormone-dependent adult pigment cell lineage and pattern in zebrafish

(2014) S. K. McMenamin et al.   SCIENCE

Loss of col8a1a function during zebrafish embryogenesis results in congenital vertebral malformations

(2013) Ryan S. Gray et al.   DEVELOPMENTAL BIOLOGY

A systematic genome-wide analysis of zebrafish protein-coding gene function

(2013) Ross N. W. Kettleborough et al.   NATURE

High-throughput hyperdimensional vertebrate phenotyping

(2013) Carlos Pardo-Martin et al.   Nature Communications

Attenuated BMP1 Function Compromises Osteogenesis, Leading to Bone Fragility in Humans and Zebrafish

(2012) P.V. Asharani et al.   AMERICAN JOURNAL OF HUMAN GENETICS

Fiji: an open-source platform for biological-image analysis

(2012) Johannes Schindelin et al.   NATURE METHODS

NIH Image to ImageJ: 25 years of image analysis

(2012) Caroline A Schneider et al.   NATURE METHODS

Rare and common variants: twenty arguments

(2012) Greg Gibson   NATURE REVIEWS GENETICS

Swim-Training Changes the Spatio-Temporal Dynamics of Skeletogenesis in Zebrafish Larvae (Danio rerio)

(2012) Ansa W. Fiaz et al.   PLoS One

Whole-animal imaging, gene function, and the Zebrafish Phenome Project

(2011) Keith C Cheng et al.   CURRENT OPINION IN GENETICS & DEVELOPMENT

Guidelines for assessment of bone microstructure in rodents using micro-computed tomography

(2010) Mary L Bouxsein et al.   JOURNAL OF BONE AND MINERAL RESEARCH

Phenomics: the next challenge

(2010) David Houle et al.   NATURE REVIEWS GENETICS

Normal table of postembryonic zebrafish development: Staging by externally visible anatomy of the living fish

(2009) David M. Parichy et al.   DEVELOPMENTAL DYNAMICS

TSH receptor activation and body composition

(2009) Anna de Lloyd et al.   JOURNAL OF ENDOCRINOLOGY

Phenomics: the systematic study of phenotypes on a genome-wide scale

(2009) R.M. Bilder et al.   NEUROSCIENCE

Quantitative Assessment of Bone Tissue Mineralization with Polychromatic Micro-Computed Tomography

(2008) Andrew J. Burghardt et al.   CALCIFIED TISSUE INTERNATIONAL

Retinoic acid and Cyp26b1 are critical regulators of osteogenesis in the axial skeleton

(2008) K. M. Spoorendonk et al.   DEVELOPMENT