Insights into RNA structure and dynamics from recent NMR and X-ray studies of the Neurospora Varkud satellite ribozyme

Rational engineering of theNeurosporaVS ribozyme to allow substrate recognition via different kissing-loop interactions

(2016) Julie Lacroix-Labonté et al.   NUCLEIC ACIDS RESEARCH

Stem-Loop V of Varkud Satellite RNA Exhibits Characteristics of the Mg2+ Bound Structure in the Presence of Monovalent Ions

(2015) Christina Bergonzo et al.   JOURNAL OF PHYSICAL CHEMISTRY B

Crystal structure of the Varkud satellite ribozyme

(2015) Nikolai B Suslov et al.   Nature Chemical Biology

The NMR structure of the II–III–VI three-way junction from theNeurosporaVS ribozyme reveals a critical tertiary interaction and provides new insights into the global ribozyme structure

(2015) Eric Bonneau et al.   RNA

Nuclear Magnetic Resonance Structure of the III–IV–V Three-Way Junction from the Varkud Satellite Ribozyme and Identification of Magnesium-Binding Sites Using Paramagnetic Relaxation Enhancement

(2014) Eric Bonneau et al.   BIOCHEMISTRY

A remarkably stable kissing-loop interaction defines substrate recognition by theNeurosporaVarkud Satellite ribozyme

(2014) Patricia Bouchard et al.   RNA

Structural Insights Into Substrate Recognition by the Neurospora Varkud Satellite Ribozyme: Importance of U-Turns at the Kissing-Loop Junction

(2013) Patricia Bouchard et al.   BIOCHEMISTRY

NMR Localization of Divalent Cations at the Active Site of the Neurospora VS Ribozyme Provides Insights into RNA–Metal-Ion Interactions

(2013) Eric Bonneau et al.   BIOCHEMISTRY

Catalysis by the nucleolytic ribozymes

(2011) David M.J. Lilley   BIOCHEMICAL SOCIETY TRANSACTIONS

Helix-length compensation studies reveal the adaptability of the VS ribozyme architecture

(2011) Julie Lacroix-Labonté et al.   NUCLEIC ACIDS RESEARCH

NMR structure of the A730 loop of the Neurospora VS ribozyme: insights into the formation of the active site

(2011) Geneviève Desjardins et al.   NUCLEIC ACIDS RESEARCH

Comprehensive survey and geometric classification of base triples in RNA structures

(2011) Amal S. Abu Almakarem et al.   NUCLEIC ACIDS RESEARCH

Mechanisms of RNA catalysis

(2011) D. M. J. Lilley   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

A portable RNA sequence whose recognition by a synthetic antibody facilitates structural determination

(2010) Yelena Koldobskaya et al.   NATURE STRUCTURAL & MOLECULAR BIOLOGY

Nucleobase-mediated general acid-base catalysis in the Varkud satellite ribozyme

(2010) T. J. Wilson et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Do the hairpin and VS ribozymes share a common catalytic mechanism based on general acid-base catalysis? A critical assessment of available experimental data

(2010) T. J. Wilson et al.   RNA

Formation of an active site in trans by interaction of two complete Varkud Satellite ribozymes

(2009) J. Ouellet et al.   RNA

Three-way RNA junctions with remote tertiary contacts: A recurrent and highly versatile fold

(2009) M. d. l. Pena et al.   RNA

Catalytic Strategies of Self-Cleaving Ribozymes

(2008) Jesse C. Cochrane et al.   ACCOUNTS OF CHEMICAL RESEARCH

Single VS Ribozyme Molecules Reveal Dynamic and Hierarchical Folding Toward Catalysis

(2008) Miguel J.B. Pereira et al.   JOURNAL OF MOLECULAR BIOLOGY

Role of SLV in SLI substrate recognition by the Neurospora VS ribozyme

(2008) P. Bouchard et al.   RNA

The ionic environment determines ribozyme cleavage rate by modulation of nucleobase pK a

(2008) M. D. Smith et al.   RNA

The Complete VS Ribozyme in Solution Studied by Small-Angle X-Ray Scattering

(2008) Jan Lipfert et al.   STRUCTURE