An Oxygen-Sensing Two-Component System in the Burkholderia cepacia Complex Regulates Biofilm, Intracellular Invasion, and Pathogenicity

Chronic granulomatous disease

(2016) Dirk Roos   BRITISH MEDICAL BULLETIN

The Galaxy platform for accessible, reproducible and collaborative biomedical analyses: 2016 update

(2016) Enis Afgan et al.   NUCLEIC ACIDS RESEARCH

Long-Term Evolution of Burkholderia multivorans during a Chronic Cystic Fibrosis Infection Reveals Shifting Forces of Selection

(2016) Inês N. Silva et al.   mSystems

KEGG as a reference resource for gene and protein annotation

(2015) Minoru Kanehisa et al.   NUCLEIC ACIDS RESEARCH

Trimmomatic: a flexible trimmer for Illumina sequence data

(2014) Anthony M. Bolger et al.   BIOINFORMATICS

Localization of Burkholderia cepacia Complex Bacteria in Cystic Fibrosis Lungs and Interactions with Pseudomonas aeruginosa in Hypoxic Mucus

(2014) Ute Schwab et al.   INFECTION AND IMMUNITY

SMART: recent updates, new developments and status in 2015

(2014) Ivica Letunic et al.   NUCLEIC ACIDS RESEARCH

Swimming Motility in a Longitudinal Collection of Clinical Isolates of Burkholderia cepacia Complex Bacteria from People with Cystic Fibrosis

(2014) James E. A. Zlosnik et al.   PLoS One

FixL-like sensor FlbS ofBrucella abortusbinds haem and is necessary for survival within eukaryotic cells

(2013) Mara S. Roset et al.   FEBS LETTERS

The unexpected discovery of a novel low-oxygen-activated locus for the anoxic persistence of Burkholderia cenocepacia

(2013) Andrea M Sass et al.   ISME Journal

Genetic variation of a bacterial pathogen within individuals with cystic fibrosis provides a record of selective pressures

(2013) Tami D Lieberman et al.   NATURE GENETICS

Response of Burkholderia cenocepacia H111 to Micro-Oxia

(2013) Gabriella Pessi et al.   PLoS One

A Comprehensive Analysis of In Vitro and In Vivo Genetic Fitness of Pseudomonas aeruginosa Using High-Throughput Sequencing of Transposon Libraries

(2013) David Skurnik et al.   PLoS Pathogens

Construction of a Broad-Host-Range Tn7-Based Vector for Single-Copy PBAD-Controlled Gene Expression in Gram-Negative Bacteria

(2012) F. Heath Damron et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Adaptive Mutations that Prevent Crosstalk Enable the Expansion of Paralogous Signaling Protein Families

(2012) Emily J. Capra et al.   CELL

Targeting Pan-Resistant Bacteria With Antibodies to a Broadly Conserved Surface Polysaccharide Expressed During Infection

(2012) David Skurnik et al.   JOURNAL OF INFECTIOUS DISEASES

Burkholderia multivorans survival and trafficking within macrophages

(2012) C. L. Schmerk et al.   JOURNAL OF MEDICAL MICROBIOLOGY

Fast gapped-read alignment with Bowtie 2

(2012) Ben Langmead et al.   NATURE METHODS

The AHL- and BDSF-Dependent Quorum Sensing Systems Control Specific and Overlapping Sets of Genes in Burkholderia cenocepacia H111

(2012) Nadine Schmid et al.   PLoS One

SagS Contributes to the Motile-Sessile Switch and Acts in Concert with BfiSR To Enable Pseudomonas aeruginosa Biofilm Formation

(2011) O. E. Petrova et al.   JOURNAL OF BACTERIOLOGY

Common Features of Environmental and Potentially Beneficial Plant-Associated Burkholderia

(2011) Zulma Rocío Suárez-Moreno et al.   MICROBIAL ECOLOGY

Parallel bacterial evolution within multiple patients identifies candidate pathogenicity genes

(2011) Tami D Lieberman et al.   NATURE GENETICS

Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiation

(2010) Cole Trapnell et al.   NATURE BIOTECHNOLOGY

Distribution of Cepacian Biosynthesis Genes among Environmental and Clinical Burkholderia Strains and Role of Cepacian Exopolysaccharide in Resistance to Stress Conditions

(2009) A. S. Ferreira et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Versatile Dual-Technology System for Markerless Allele Replacement in Burkholderia pseudomallei

(2009) C. M. Lopez et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

A Novel Signaling Network Essential for Regulating Pseudomonas aeruginosa Biofilm Development

(2009) Olga E. Petrova et al.   PLoS Pathogens

Bad Bugs, No Drugs: No ESKAPE! An Update from the Infectious Diseases Society of America

(2008) Helen W. Boucher et al.   CLINICAL INFECTIOUS DISEASES

Burkholderia cenocepacia Requires the RpoN Sigma Factor for Biofilm Formation and Intracellular Trafficking within Macrophages

(2008) M. S. Saldias et al.   INFECTION AND IMMUNITY

Burkholderia cenocepacia requires RpoE for growth under stress conditions and delay of phagolysosomal fusion in macrophages

(2008) R. S. Flannagan et al.   MICROBIOLOGY-SGM