Evolutionary shifts in gene expression decoupled from gene duplication across functionally distinct spider silk glands

Inferring regulatory change from gene expression: the confounding effects of tissue scaling

(2016) Stephen H. Montgomery et al.   MOLECULAR ECOLOGY

Evidence from Multiple Species that Spider Silk Glue Component ASG2 is a Spidroin

(2016) Matthew A. Collin et al.   Scientific Reports

Spider Transcriptomes Identify Ancient Large-Scale Gene Duplication Event Potentially Important in Silk Gland Evolution

(2015) Thomas H. Clarke et al.   Genome Biology and Evolution

Proteomic Evidence for Components of Spider Silk Synthesis from Black Widow Silk Glands and Fibers

(2015) Ro Crystal Chaw et al.   JOURNAL OF PROTEOME RESEARCH

Dragline Silk: A Fiber Assembled with Low-Molecular-Weight Cysteine-Rich Proteins

(2014) Thanh Pham et al.   BIOMACROMOLECULES

Phylogenomics Resolves a Spider Backbone Phylogeny and Rejects a Prevailing Paradigm for Orb Web Evolution

(2014) Jason E. Bond et al.   CURRENT BIOLOGY

Comparison of the transcriptional landscapes between human and mouse tissues

(2014) Shin Lin et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Complex gene expression in the dragline silk producing glands of the Western black widow (Latrodectus hesperus)

(2013) Amanda Lane et al.   BMC GENOMICS

Spit and Venom from Scytodes Spiders: A Diverse and Distinct Cocktail

(2013) Pamela A. Zobel-Thropp et al.   JOURNAL OF PROTEOME RESEARCH

Sequence-Structure-Property Relationships of Recombinant Spider Silk Proteins: Integration of Biopolymer Design, Processing, and Modeling

(2012) Sreevidhya Tarakkad Krishnaji et al.   ADVANCED FUNCTIONAL MATERIALS

Spider Glue Proteins Have Distinct Architectures Compared with Traditional Spidroin Family Members

(2012) Keshav Vasanthavada et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Ancient Properties of Spider Silks Revealed by the Complete Gene Sequence of the Prey-Wrapping Silk Protein (AcSp1)

(2012) Nadia A. Ayoub et al.   MOLECULAR BIOLOGY AND EVOLUTION

Comparative studies of gene expression and the evolution of gene regulation

(2012) Irene Gallego Romero et al.   NATURE REVIEWS GENETICS

Variation in Protein Intake Induces Variation in Spider Silk Expression

(2012) Sean J. Blamires et al.   PLoS One

Evolutionary Dynamics of Gene and Isoform Regulation in Mammalian Tissues

(2012) J. Merkin et al.   SCIENCE

RSEM: accurate transcript quantification from RNA-Seq data with or without a reference genome

(2011) Bo Li et al.   BMC BIOINFORMATICS

The evolution of gene expression levels in mammalian organs

(2011) David Brawand et al.   NATURE

SignalP 4.0: discriminating signal peptides from transmembrane regions

(2011) Thomas Nordahl Petersen et al.   NATURE METHODS

phytools: an R package for phylogenetic comparative biology (and other things)

(2011) Liam J. Revell   Methods in Ecology and Evolution

Changes in the Adhesive Properties of Spider Aggregate Glue During the Evolution of Cobwebs

(2011) Vasav Sahni et al.   Scientific Reports

Untangling spider silk evolution with spidroin terminal domains

(2010) Jessica E Garb et al.   BMC EVOLUTIONARY BIOLOGY

Spider silk proteins: recent advances in recombinant production, structure–function relationships and biomedical applications

(2010) Anna Rising et al.   CELLULAR AND MOLECULAR LIFE SCIENCES

Selectivity in Mammalian Extinction Risk and Threat Types: a New Measure of Phylogenetic Signal Strength in Binary Traits

(2010) SUSANNE A. FRITZ et al.   CONSERVATION BIOLOGY

Origins, evolution, and phenotypic impact of new genes

(2010) H. Kaessmann   GENOME RESEARCH

Prey type, vibrations and handling interactively influence spider silk expression

(2010) S. J. Blamires et al.   JOURNAL OF EXPERIMENTAL BIOLOGY

Recombinant Spider Silk Proteins for Applications in Biomaterials

(2010) Kristina Spiess et al.   MACROMOLECULAR BIOSCIENCE

Gene ontology analysis for RNA-seq: accounting for selection bias

(2010) Matthew D Young et al.   GENOME BIOLOGY

A scaling normalization method for differential expression analysis of RNA-seq data

(2010) Mark D Robinson et al.   GENOME BIOLOGY

trimAl: a tool for automated alignment trimming in large-scale phylogenetic analyses

(2009) S. Capella-Gutierrez et al.   BIOINFORMATICS

edgeR: a Bioconductor package for differential expression analysis of digital gene expression data

(2009) M. D. Robinson et al.   BIOINFORMATICS

Spider Web Glue: Two Proteins Expressed from Opposite Strands of the Same DNA Sequence

(2009) Omer Choresh et al.   BIOMACROMOLECULES

Reconstructing web evolution and spider diversification in the molecular era

(2009) T. A. Blackledge et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Spider Minor Ampullate Silk Proteins Are Constituents of Prey Wrapping Silk in the Cob WeaverLatrodectus hesperus†

(2008) Coby La Mattina et al.   BIOCHEMISTRY