Beyond the Michaelis-Menten equation: Accurate and efficient estimation of enzyme kinetic parameters

Reduction of multiscale stochastic biochemical reaction networks using exact moment derivation

(2017) Jae Kyoung Kim et al.   PLoS Computational Biology

A Blueprint for a Synthetic Genetic Feedback Controller to Reprogram Cell Fate

(2017) Domitilla Del Vecchio et al.   Cell Systems

On the estimation errors of KM and V from time-course experiments using the Michaelis–Menten equation

(2016) Wylie Stroberg et al.   BIOPHYSICAL CHEMISTRY

Model-driven experimental approach reveals the complex regulatory distribution of p53 by the circadian factor Period 2

(2016) Tetsuya Gotoh et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Direct evidence of the molecular basis for biological silicon transport

(2016) Michael J. Knight et al.   Nature Communications

Enzyme kinetics: the whole picture reveals hidden meanings

(2015) Maria F. Pinto et al.   FEBS Journal

Mathematical framework for activity-based cancer biomarkers

(2015) Gabriel A. Kwong et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Emergent genetic oscillations in a synthetic microbial consortium

(2015) Y. Chen et al.   SCIENCE

The Validity of Quasi-Steady-State Approximations in Discrete Stochastic Simulations

(2014) Jae Kyoung Kim et al.   BIOPHYSICAL JOURNAL

New trends and perspectives in nonlinear intracellular dynamics: one century from Michaelis–Menten paper

(2014) Alberto M. Bersani et al.   CONTINUUM MECHANICS AND THERMODYNAMICS

New types of experimental data shape the use of enzyme kinetics for dynamic network modeling

(2013) Katja Tummler et al.   FEBS Journal

A century of enzyme kinetic analysis, 1913 to 2013

(2013) Kenneth A. Johnson   FEBS LETTERS

Quantitative full time course analysis of nonlinear enzyme cycling kinetics

(2013) Wenxiang Cao et al.   Scientific Reports

Noise Attenuation in the ON and OFF States of Biological Switches

(2013) Meng Chen et al.   ACS Synthetic Biology

Spatial Stochastic Dynamics Enable Robust Cell Polarization

(2013) Michael J. Lawson et al.   PLoS Computational Biology

Multiplexed Tracking of Protease Activity Using a Single Color of Quantum Dot Vector and a Time-Gated Förster Resonance Energy Transfer Relay

(2012) W. Russ Algar et al.   ANALYTICAL CHEMISTRY

The slow-scale linear noise approximation: an accurate, reduced stochastic description of biochemical networks under timescale separation conditions

(2012) Philipp Thomas et al.   BMC Systems Biology

Proteolytic Activity at Quantum Dot-Conjugates: Kinetic Analysis Reveals Enhanced Enzyme Activity and Localized Interfacial “Hopping”

(2012) W. Russ Algar et al.   NANO LETTERS

Integration of Kinetic Analysis of Reaction Curve with a Proper Classical Approach for Enzymatic Analysis

(2012) Xiaolan Yang et al.   TheScientificWorldJOURNAL

Long Signaling Cascades Tend to Attenuate Retroactivity

(2011) Hamid R. Ossareh et al.   BIOPHYSICAL JOURNAL

Inference for discretely observed stochastic kinetic networks with applications to epidemic modeling

(2011) Boseung Choi et al.   BIOSTATISTICS

Legitimacy of the stochastic Michaelis–Menten approximation

(2011) K.R. Sanft et al.   IET Systems Biology

Classic and contemporary approaches to modeling biochemical reactions

(2010) W. W. Chen et al.   GENES & DEVELOPMENT

FitSpace Explorer: An algorithm to evaluate multidimensional parameter space in fitting kinetic data

(2008) Kenneth A. Johnson et al.   ANALYTICAL BIOCHEMISTRY

Global Kinetic Explorer: A new computer program for dynamic simulation and fitting of kinetic data

(2008) Kenneth A. Johnson et al.   ANALYTICAL BIOCHEMISTRY

Stochastic Simulation of Enzyme-Catalyzed Reactions with Disparate Timescales

(2008) Debashis Barik et al.   BIOPHYSICAL JOURNAL

The total quasi-steady-state approximation for complex enzyme reactions

(2008) Morten Gram Pedersen et al.   MATHEMATICS AND COMPUTERS IN SIMULATION

Monitoring of enzymatic proteolysis on a electroluminescent-CCD microchip platform using quantum dot-peptide substrates

(2008) Kim E. Sapsford et al.   SENSORS AND ACTUATORS B-CHEMICAL