The impact of microRNAs on transcriptional heterogeneity and gene co-expression across single embryonic stem cells
Published 2017 View Full Article
- Home
- Publications
- Publication Search
- Publication Details
Title
The impact of microRNAs on transcriptional heterogeneity and gene co-expression across single embryonic stem cells
Authors
Keywords
-
Journal
Nature Communications
Volume 8, Issue -, Pages 14126
Publisher
Springer Nature
Online
2017-01-19
DOI
10.1038/ncomms14126
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- FOXD3 Regulates Pluripotent Stem Cell Potential by Simultaneously Initiating and Repressing Enhancer Activity
- (2016) Raga Krishnakumar et al. Cell Stem Cell
- A reverse-engineering approach to dissect post-translational modulators of transcription factor’s activity from transcriptional data
- (2015) Gennaro Gambardella et al. BMC BIOINFORMATICS
- Droplet Barcoding for Single-Cell Transcriptomics Applied to Embryonic Stem Cells
- (2015) Allon M. Klein et al. CELL
- Single Cell RNA-Sequencing of Pluripotent States Unlocks Modular Transcriptional Variation
- (2015) Aleksandra A. Kolodziejczyk et al. Cell Stem Cell
- Computational assignment of cell-cycle stage from single-cell transcriptome data
- (2015) Antonio Scialdone et al. METHODS
- Computational analysis of cell-to-cell heterogeneity in single-cell RNA-sequencing data reveals hidden subpopulations of cells
- (2015) Florian Buettner et al. NATURE BIOTECHNOLOGY
- MicroRNA control of protein expression noise
- (2015) J. M. Schmiedel et al. SCIENCE
- Predicting effective microRNA target sites in mammalian mRNAs
- (2015) Vikram Agarwal et al. eLife
- The Molecular Signatures Database Hallmark Gene Set Collection
- (2015) Arthur Liberzon et al. Cell Systems
- Endogenous miRNA and Target Concentrations Determine Susceptibility to Potential ceRNA Competition
- (2014) Andrew D. Bosson et al. MOLECULAR CELL
- Deconstructing transcriptional heterogeneity in pluripotent stem cells
- (2014) Roshan M. Kumar et al. NATURE
- Bayesian approach to single-cell differential expression analysis
- (2014) Peter V Kharchenko et al. NATURE METHODS
- Differential network analysis for the identification of condition-specific pathway activity and regulation
- (2013) Gennaro Gambardella et al. BIOINFORMATICS
- MicroRNA-based discovery of barriers to dedifferentiation of fibroblasts to pluripotent stem cells
- (2013) Robert L Judson et al. NATURE STRUCTURAL & MOLECULAR BIOLOGY
- miRNAs confer phenotypic robustness to gene networks by suppressing biological noise
- (2013) Velia Siciliano et al. Nature Communications
- miR-294/miR-302 Promotes Proliferation, Suppresses G1-S Restriction Point, and Inhibits ESC Differentiation through Separable Mechanisms
- (2013) Yangming Wang et al. Cell Reports
- The Transcriptional and Epigenomic Foundations of Ground State Pluripotency
- (2012) Hendrik Marks et al. CELL
- NIH Image to ImageJ: 25 years of image analysis
- (2012) Caroline A Schneider et al. NATURE METHODS
- pathClass: an R-package for integration of pathway knowledge into support vector machines for biomarker discovery
- (2011) M. Johannes et al. BIOINFORMATICS
- RSEM: accurate transcript quantification from RNA-Seq data with or without a reference genome
- (2011) Bo Li et al. BMC BIOINFORMATICS
- Queueing up for enzymatic processing: correlated signaling through coupled degradation
- (2011) N. A. Cookson et al. Molecular Systems Biology
- Genome-wide identification of Ago2 binding sites from mouse embryonic stem cells with and without mature microRNAs
- (2011) Anthony K L Leung et al. NATURE STRUCTURAL & MOLECULAR BIOLOGY
- Analysis of microRNA transcriptome by deep sequencing of small RNA libraries of peripheral blood
- (2010) Candida Vaz et al. BMC GENOMICS
- Opposing microRNA families regulate self-renewal in mouse embryonic stem cells
- (2010) Collin Melton et al. NATURE
- Desperately seeking microRNA targets
- (2010) Marshall Thomas et al. NATURE STRUCTURAL & MOLECULAR BIOLOGY
- From ‘differential expression’ to ‘differential networking’ – identification of dysfunctional regulatory networks in diseases
- (2010) Alberto de la Fuente TRENDS IN GENETICS
- Genome-Wide Identification of Targets and Function of Individual MicroRNAs in Mouse Embryonic Stem Cells
- (2010) Sophie A. Hanina et al. PLoS Genetics
- Comprehensive modeling of microRNA targets predicts functional non-conserved and non-canonical sites
- (2010) Doron Betel et al. GENOME BIOLOGY
- Differential expression analysis for sequence count data
- (2010) Simon Anders et al. GENOME BIOLOGY
- MicroRNAs: Target Recognition and Regulatory Functions
- (2009) David P. Bartel CELL
- Genome-wide identification of post-translational modulators of transcription factor activity in human B cells
- (2009) Kai Wang et al. NATURE BIOTECHNOLOGY
- Erratum: Corrigendum: Transfection of small RNAs globally perturbs gene regulation by endogenous microRNAs
- (2009) Aly A Khan et al. NATURE BIOTECHNOLOGY
- Many roads to maturity: microRNA biogenesis pathways and their regulation
- (2009) Julia Winter et al. NATURE CELL BIOLOGY
- Connecting microRNA Genes to the Core Transcriptional Regulatory Circuitry of Embryonic Stem Cells
- (2008) Alexander Marson et al. CELL
- Mouse ES cells express endogenous shRNAs, siRNAs, and other Microprocessor-independent, Dicer-dependent small RNAs
- (2008) J. E. Babiarz et al. GENES & DEVELOPMENT
- The ground state of embryonic stem cell self-renewal
- (2008) Qi-Long Ying et al. NATURE
- Embryonic stem cell–specific microRNAs regulate the G1-S transition and promote rapid proliferation
- (2008) Yangming Wang et al. NATURE GENETICS
Find Funding. Review Successful Grants.
Explore over 25,000 new funding opportunities and over 6,000,000 successful grants.
ExploreFind the ideal target journal for your manuscript
Explore over 38,000 international journals covering a vast array of academic fields.
Search