Correlating Anatomy and Function with Gene Expression in Individual Neurons by Combining in Vivo Labeling, Patch Clamp, and Single Cell RNA-seq
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Title
Correlating Anatomy and Function with Gene Expression in Individual Neurons by Combining in Vivo Labeling, Patch Clamp, and Single Cell RNA-seq
Authors
Keywords
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Journal
Frontiers in Cellular Neuroscience
Volume 11, Issue -, Pages -
Publisher
Frontiers Media SA
Online
2017-11-30
DOI
10.3389/fncel.2017.00376
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Note: Only part of the references are listed.- Adult mouse cortical cell taxonomy revealed by single cell transcriptomics
- (2016) Bosiljka Tasic et al. NATURE NEUROSCIENCE
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- (2016) Mark S Cembrowski et al. eLife
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- (2015) Evan Z. Macosko et al. CELL
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- (2015) János Fuzik et al. NATURE BIOTECHNOLOGY
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- (2015) Cathryn R Cadwell et al. NATURE BIOTECHNOLOGY
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- (2015) Jasper Poort et al. NEURON
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- (2015) A. Zeisel et al. SCIENCE
- HTSeq--a Python framework to work with high-throughput sequencing data
- (2014) S. Anders et al. BIOINFORMATICS
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- (2014) M. E. Garrett et al. JOURNAL OF NEUROSCIENCE
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- (2014) Peter V Kharchenko et al. NATURE METHODS
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- (2014) Bryan A. Strange et al. NATURE REVIEWS NEUROSCIENCE
- Translaminar Inhibitory Cells Recruited by Layer 6 Corticothalamic Neurons Suppress Visual Cortex
- (2014) Dante S. Bortone et al. NEURON
- The Stimulus Selectivity and Connectivity of Layer Six Principal Cells Reveals Cortical Microcircuits Underlying Visual Processing
- (2014) Mateo Vélez-Fort et al. NEURON
- Accounting for technical noise in single-cell RNA-seq experiments
- (2013) Philip Brennecke et al. NATURE METHODS
- Cortico-cortical projections in mouse visual cortex are functionally target specific
- (2013) Lindsey L Glickfeld et al. NATURE NEUROSCIENCE
- Inhibition of inhibition in visual cortex: the logic of connections between molecularly distinct interneurons
- (2013) Carsten K Pfeffer et al. NATURE NEUROSCIENCE
- New insights into the classification and nomenclature of cortical GABAergic interneurons
- (2013) Javier DeFelipe et al. NATURE REVIEWS NEUROSCIENCE
- Chronic Cellular Imaging of Entire Cortical Columns in Awake Mice Using Microprisms
- (2013) Mark L. Andermann et al. NEURON
- The Neuron Identity Problem: Form Meets Function
- (2013) Gord Fishell et al. NEURON
- Geniculocortical Input Drives Genetic Distinctions Between Primary and Higher-Order Visual Areas
- (2013) S.-J. Chou et al. SCIENCE
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- (2012) Shawn R. Olsen et al. NATURE
- Multiple dynamic representations in the motor cortex during sensorimotor learning
- (2012) D. Huber et al. NATURE
- A neural circuit for spatial summation in visual cortex
- (2012) Hillel Adesnik et al. NATURE
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- (2012) Ben Langmead et al. NATURE METHODS
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- (2012) Tamar Hashimshony et al. Cell Reports
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- (2011) Mark L. Andermann et al. NEURON
- Functional Specialization of Seven Mouse Visual Cortical Areas
- (2011) James H. Marshel et al. NEURON
- A Resource of Cre Driver Lines for Genetic Targeting of GABAergic Neurons in Cerebral Cortex
- (2011) Hiroki Taniguchi et al. NEURON
- In vivo Labeling of Constellations of Functionally Identified Neurons for Targeted in vitro Recordings
- (2011) Anthony D. Lien et al. Frontiers in Neural Circuits
- Areal and laminar differentiation in the mouse neocortex using large scale gene expression data
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- (2009) Linda Madisen et al. NATURE NEUROSCIENCE
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- (2008) Myriam Heiman et al. CELL
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