Genome-wide Association Analysis Tracks Bacterial Leaf Blight Resistance Loci In Rice Diverse Germplasm

Characterization of a Pipecolic Acid Biosynthesis Pathway Required for Systemic Acquired Resistance

(2016) Pingtao Ding et al.   PLANT CELL

Pyramiding of two rice bacterial blight resistance genes, Xa3 and Xa4, and a closely linked cold-tolerance QTL on chromosome 11

(2016) Yeon-Jae Hur et al.   THEORETICAL AND APPLIED GENETICS

Effector Diversification Contributes to Xanthomonas oryzae pv. oryzae Phenotypic Adaptation in a Semi-Isolated Environment

(2016) Ian Lorenzo Quibod et al.   Scientific Reports

XA23 Is an Executor R Protein and Confers Broad-Spectrum Disease Resistance in Rice

(2015) Chunlian Wang et al.   Molecular Plant

BAHD or SCPL acyltransferase? What a dilemma for acylation in the world of plant phenolic compounds

(2015) Thibaut Bontpart et al.   NEW PHYTOLOGIST

The wheat resistance geneLr34results in the constitutive induction of multiple defense pathways in transgenic barley

(2015) Harsh Chauhan et al.   PLANT JOURNAL

Identification and fine-mapping of a new resistance gene, Xa40, conferring resistance to bacterial blight races in rice (Oryza sativa L.)

(2015) Suk-Man Kim et al.   THEORETICAL AND APPLIED GENETICS

SNP-Seek database of SNPs derived from 3000 rice genomes

(2014) Nickolai Alexandrov et al.   NUCLEIC ACIDS RESEARCH

The Rice TAL Effector-Dependent Resistance Protein XA10 Triggers Cell Death and Calcium Depletion in the Endoplasmic Reticulum

(2014) D. Tian et al.   PLANT CELL

Xa39, a novel dominant gene conferring broad-spectrum resistance toXanthomonas oryzaepv.oryzaein rice

(2014) F. Zhang et al.   PLANT PATHOLOGY

TASSEL-GBS: A High Capacity Genotyping by Sequencing Analysis Pipeline

(2014) Jeffrey C. Glaubitz et al.   PLoS One

Characterization of a Purine Permease Family GeneOsPUP7Involved in Growth and Development Control in Rice

(2013) Zhuyun Qi et al.   Journal of Integrative Plant Biology

MEGA6: Molecular Evolutionary Genetics Analysis Version 6.0

(2013) Koichiro Tamura et al.   MOLECULAR BIOLOGY AND EVOLUTION

Rice MtN3/Saliva/SWEET Family Genes and Their Homologs in Cellular Organisms

(2013) Meng Yuan et al.   Molecular Plant

NRT/PTR transporters are essential for translocation of glucosinolate defence compounds to seeds

(2012) Hussam Hassan Nour-Eldin et al.   NATURE

An efficient multi-locus mixed-model approach for genome-wide association studies in structured populations

(2012) Vincent Segura et al.   NATURE GENETICS

Allelic Analysis of Sheath Blight Resistance with Association Mapping in Rice

(2012) Limeng Jia et al.   PLoS One

Identification of an abscisic acid transporter by functional screening using the receptor complex as a sensor

(2012) Y. Kanno et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Functions of ABC transporters in plants

(2011) Tobias Kretzschmar et al.   Essays in Biochemistry

Controlling rice bacterial blight in Africa: Needs and prospects

(2011) Valérie Verdier et al.   JOURNAL OF BIOTECHNOLOGY

New PCR-based sequence-tagged site marker for bacterial blight resistance gene Xa38 of rice

(2011) Hemal Bhasin et al.   MOLECULAR BREEDING

High-throughput single nucleotide polymorphism genotyping for breeding applications in rice using the BeadXpress platform

(2011) Michael J. Thomson et al.   MOLECULAR BREEDING

MPK6, sphinganine and the LCB2a gene from serine palmitoyltransferase are required in the signaling pathway that mediates cell death induced by long chain bases in Arabidopsis

(2011) Mariana Saucedo-García et al.   NEW PHYTOLOGIST

A paralog of the MtN3/saliva family recessively confers race-specific resistance to Xanthomonas oryzae in rice

(2011) QINSONG LIU et al.   PLANT CELL AND ENVIRONMENT

A Robust, Simple Genotyping-by-Sequencing (GBS) Approach for High Diversity Species

(2011) Robert J. Elshire et al.   PLoS One

Genetic analysis and molecular mapping of a novel recessive gene xa34(t) for resistance against Xanthomonas oryzae pv. oryzae

(2011) Shen Chen et al.   THEORETICAL AND APPLIED GENETICS

Genome-wide association mapping reveals a rich genetic architecture of complex traits in Oryza sativa

(2011) Keyan Zhao et al.   Nature Communications

ALCHEMY: a reliable method for automated SNP genotype calling for small batch sizes and highly homozygous populations

(2010) Mark H. Wright et al.   BIOINFORMATICS

Variance component model to account for sample structure in genome-wide association studies

(2010) Hyun Min Kang et al.   NATURE GENETICS

Performance of Single Nucleotide Polymorphisms versus Haplotypes for Genome-Wide Association Analysis in Barley

(2010) Aaron J. Lorenz et al.   PLoS One

Development of a Research Platform for Dissecting Phenotype–Genotype Associations in Rice (Oryza spp.)

(2010) Chih-Wei Tung et al.   Rice

Software engineering the mixed model for genome-wide association studies on large samples

(2009) Z. Zhang et al.   BRIEFINGS IN BIOINFORMATICS

Identification and molecular mapping of the rice bacterial blight resistance gene allelic to Xa7 from an elite restorer line Zhenhui 084

(2009) Yuchen Zhang et al.   EUROPEAN JOURNAL OF PLANT PATHOLOGY

Physical mapping, expression analysis and polymorphism survey of resistance gene analogues on chromosome 11 of rice

(2009) Irfan A. Ghazi et al.   JOURNAL OF BIOSCIENCES

A Serine Carboxypeptidase-Like Acyltransferase Is Required for Synthesis of Antimicrobial Compounds and Disease Resistance in Oats

(2009) S. T. Mugford et al.   PLANT CELL

A single plant resistance gene promoter engineered to recognize multiple TAL effectors from disparate pathogens

(2009) P. Romer et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

A Putative ABC Transporter Confers Durable Resistance to Multiple Fungal Pathogens in Wheat

(2009) S. G. Krattinger et al.   SCIENCE

Efficient Control of Population Structure in Model Organism Association Mapping

(2008) H. M. Kang et al.   GENETICS

A novel bacterial blight resistance gene from Oryza nivara mapped to 38 kb region on chromosome 4L and transferred to Oryza sativa L.

(2008) KULJIT K. CHEEMA et al.   Genetics Research

Efficient Methods to Compute Genomic Predictions

(2008) P.M. VanRaden   JOURNAL OF DAIRY SCIENCE

High-resolution mapping and gene prediction of Xanthomonas Oryzae pv. Oryzae resistance gene Xa7

(2008) Shen Chen et al.   MOLECULAR BREEDING

The F-Box Protein ACRE189/ACIF1 Regulates Cell Death and Defense Responses Activated during Pathogen Recognition in Tobacco and Tomato

(2008) H. A. van den Burg et al.   PLANT CELL

Fine mapping of a strong QTL of field resistance against rice blast, Pikahei-1(t), from upland rice Kahei, utilizing a novel resistance evaluation system in the greenhouse

(2008) Xin Xu et al.   THEORETICAL AND APPLIED GENETICS

Status and Prospects of Association Mapping in Plants

(2008) Chengsong Zhu et al.   Plant Genome