Evolutionary relationships and expression analysis of EUL domain proteins in rice (Oryza sativa)

Conformational divergence in the HA-33/HA-17 trimer of serotype C and D botulinum toxin complex

(2016) Yoshimasa Sagane et al.   BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS

Genome-wide identification and domain organization of lectin domains in cucumber

(2016) Liuyi Dang et al.   PLANT PHYSIOLOGY AND BIOCHEMISTRY

A Developmental and Molecular View of Formation of Auxin-Induced Nodule-Like Structures in Land Plants

(2016) Ryan Hiltenbrand et al.   Frontiers in Plant Science

Protein-Carbohydrate Interactions as Part of Plant Defense and Animal Immunity

(2015) Kristof De Schutter et al.   MOLECULES

Distribution and Evolution of the Lectin Family in Soybean (Glycine max)

(2015) Sofie Van Holle et al.   MOLECULES

JASPAR 2016: a major expansion and update of the open-access database of transcription factor binding profiles

(2015) Anthony Mathelier et al.   NUCLEIC ACIDS RESEARCH

TENOR: Database for Comprehensive mRNA-Seq Experiments in Rice

(2015) Yoshihiro Kawahara et al.   PLANT AND CELL PHYSIOLOGY

The Arabidopsis lectin EULS3 is involved in stomatal closure

(2015) Jonas Van Hove et al.   PLANT SCIENCE

Abscisic-acid-dependent basic leucine zipper (bZIP) transcription factors in plant abiotic stress

(2015) Aditya Banerjee et al.   PROTOPLASMA

Quantitative analysis of proteome extracted from barley crowns grown under different drought conditions

(2015) Pavel Vítámvás et al.   Frontiers in Plant Science

High-resolution crystal structure of HA33 of botulinum neurotoxin type B progenitor toxin complex

(2014) Kwangkook Lee et al.   BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS

Determination and Inference of Eukaryotic Transcription Factor Sequence Specificity

(2014) Matthew T. Weirauch et al.   CELL

Comparative proteomic analysis of indica and japonica rice varieties

(2014) Yanhua Yang et al.   GENETICS AND MOLECULAR BIOLOGY

The carbohydrate-binding promiscuity of Euonymus europaeus lectin is predicted to involve a single binding site

(2014) Mark Agostino et al.   GLYCOBIOLOGY

Transcriptional profiling of the lectin ArathEULS3 from Arabidopsis thaliana toward abiotic stresses

(2014) J. Van Hove et al.   JOURNAL OF PLANT PHYSIOLOGY

PLAZA 3.0: an access point for plant comparative genomics

(2014) Sebastian Proost et al.   NUCLEIC ACIDS RESEARCH

SNP-Seek database of SNPs derived from 3000 rice genomes

(2014) Nickolai Alexandrov et al.   NUCLEIC ACIDS RESEARCH

The InterPro protein families database: the classification resource after 15 years

(2014) Alex Mitchell et al.   NUCLEIC ACIDS RESEARCH

Inference of Transcriptional Networks inArabidopsisthrough Conserved Noncoding Sequence Analysis

(2014) Jan Van de Velde et al.   PLANT CELL

Over-expression of ArathEULS3 confers ABA sensitivity and drought tolerance in Arabidopsis

(2014) Dekuan Li et al.   PLANT CELL TISSUE AND ORGAN CULTURE

Metabolic variation between japonica and indica rice cultivars as revealed by non-targeted metabolomics

(2014) Chaoyang Hu et al.   Scientific Reports

Crystal Structure ofClostridium botulinumWhole Hemagglutinin Reveals a Huge Triskelion-shaped Molecular Complex

(2013) Sho Amatsu et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

OsbZIP71, a bZIP transcription factor, confers salinity and drought tolerance in rice

(2013) Citao Liu et al.   PLANT MOLECULAR BIOLOGY

Promoter Analysis for Three Types of EUL-Related Rice Lectins in Transgenic Arabidopsis

(2013) Bassam Al Atalah et al.   PLANT MOLECULAR BIOLOGY REPORTER

Inferring duplications, losses, transfers and incomplete lineage sorting with nonbinary species trees

(2012) Maureen Stolzer et al.   BIOINFORMATICS

Expression analysis of a type S2 EUL-related lectin from rice in Pichia pastoris

(2012) Bassam Al Atalah et al.   GLYCOCONJUGATE JOURNAL

Wheat Drought-Responsive Grain Proteome Analysis by Linear and Nonlinear 2-DE and MALDI-TOF Mass Spectrometry

(2012) Shan-Shan Jiang et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

Crystal structure of 1,3Gal43A, an exo-β-1,3-galactanase from Clostridium thermocellum

(2012) Daohua Jiang et al.   JOURNAL OF STRUCTURAL BIOLOGY

Transcriptional reprogramming by root knot and migratory nematode infection in rice

(2012) Tina Kyndt et al.   NEW PHYTOLOGIST

PGDD: a database of gene and genome duplication in plants

(2012) Tae-Ho Lee et al.   NUCLEIC ACIDS RESEARCH

Molecular diversity of the two sugar-binding sites of the β-trefoil lectin HA33/C (HA1) from Clostridium botulinum type C neurotoxin

(2011) Toshio Nakamura et al.   ARCHIVES OF BIOCHEMISTRY AND BIOPHYSICS

Lectin activity of the nucleocytoplasmic EUL protein from Arabidopsis thaliana

(2011) Jonas Van Hove et al.   BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS

High-resolution mapping of open chromatin in the rice genome

(2011) W. Zhang et al.   GENOME RESEARCH

SignalP 4.0: discriminating signal peptides from transmembrane regions

(2011) Thomas Nordahl Petersen et al.   NATURE METHODS

GenomeView: a next-generation genome browser

(2011) T. Abeel et al.   NUCLEIC ACIDS RESEARCH

SwissDock, a protein-small molecule docking web service based on EADock DSS

(2011) A. Grosdidier et al.   NUCLEIC ACIDS RESEARCH

Modular Evolution and the Origins of Symmetry: Reconstruction of a Three-Fold Symmetric Globular Protein

(2011) Aron Broom et al.   STRUCTURE

Toward the estimation of the absolute quality of individual protein structure models

(2010) Pascal Benkert et al.   BIOINFORMATICS

BEDTools: a flexible suite of utilities for comparing genomic features

(2010) Aaron R. Quinlan et al.   BIOINFORMATICS

Genome-wide gene responses in a transgenic rice line carrying the maize resistance gene Rxo1 to the rice bacterial streak pathogen, Xanthomonas oryzae pv. oryzicola

(2010) Yong-Li Zhou et al.   BMC GENOMICS

Modulation of transcription factor and metabolic pathway genes in response to water-deficit stress in rice

(2010) Swatismita Ray et al.   FUNCTIONAL & INTEGRATIVE GENOMICS

Tissue-Adapted Invasion Strategies of the Rice Blast FungusMagnaporthe oryzae

(2010) Sylvain Marcel et al.   PLANT CELL

Gene Expression Profiles Deciphering Rice Phenotypic Variation between Nipponbare (Japonica) and 93-11 (Indica) during Oxidative Stress

(2010) Fengxia Liu et al.   PLoS One

Nucleocytoplasmic plant lectins

(2009) Nausicaä Lannoo et al.   BIOCHIMICA ET BIOPHYSICA ACTA-GENERAL SUBJECTS

Proteins with an Euonymus lectin-like domain are ubiquitous in Embryophyta

(2009) Elke Fouquaert et al.   BMC PLANT BIOLOGY

Characterization of WRKY co-regulatory networks in rice and Arabidopsis

(2009) Stefano Berri et al.   BMC PLANT BIOLOGY

Genome-wide analysis of rice (Oryza sativa L. subsp. japonica) TATA box and Y Patch promoter elements

(2009) P. Civáň et al.   GENOME

Crystallographic Snapshots of an Entire Reaction Cycle for a Retaining Xylanase from Streptomyces olivaceoviridis E-86

(2009) Ryuichiro Suzuki et al.   JOURNAL OF BIOCHEMISTRY

A β-l-Arabinopyranosidase fromStreptomyces avermitilisIs a Novel Member of Glycoside Hydrolase Family 27

(2009) Hitomi Ichinose et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Unraveling Transcriptional Control in Arabidopsis Using cis-Regulatory Elements and Coexpression Networks

(2009) K. Vandepoele et al.   PLANT PHYSIOLOGY

New changes in the plasma-membrane-associated proteome of rice roots under salt stress

(2009) Yanwei Cheng et al.   PROTEOMICS

Identification of drought-responsive genes in roots of upland rice (Oryza sativa L)

(2008) Aline R Rabello et al.   BMC GENOMICS

Structure and Mode of Action of a Mosquitocidal Holotoxin

(2008) Nora Treiber et al.   JOURNAL OF MOLECULAR BIOLOGY

Systematic sequence analysis and identification of tissue-specific or stress-responsive genes of NAC transcription factor family in rice

(2008) Yujie Fang et al.   MOLECULAR GENETICS AND GENOMICS

Trans-acting factor designated OSBZ8 interacts with both typical abscisic acid responsive elements as well as abscisic acid responsive element-like sequences in the vegetative tissues of indica rice cultivars

(2008) Aryadeep RoyChoudhury et al.   PLANT CELL REPORTS

The "Old" Euonymus europaeus Agglutinin Represents a Novel Family of Ubiquitous Plant Proteins

(2008) E. Fouquaert et al.   PLANT PHYSIOLOGY

Identification of OsbZIP72 as a positive regulator of ABA response and drought tolerance in rice

(2008) Guojun Lu et al.   PLANTA