Gut microbial diversity analysis using Illumina sequencing for functional dyspepsia with liver depression-spleen deficiency syndrome and the interventional Xiaoyaosan in a rat model

Functional dyspepsia

(2016) Nicholas J. Talley et al.   CURRENT OPINION IN GASTROENTEROLOGY

The Intestinal Microenvironment and Functional Gastrointestinal Disorders

(2016) Giovanni Barbara et al.   GASTROENTEROLOGY

Mucosal adherent bacterial dysbiosis in patients with colorectal adenomas

(2016) Yingying Lu et al.   Scientific Reports

Fusobacterium nucleatum: a commensal-turned pathogen

(2015) Yiping W Han   CURRENT OPINION IN MICROBIOLOGY

The gut microbiota and host health: a new clinical frontier

(2015) Julian R Marchesi et al.   GUT

Therapeutic strategies for functional dyspepsia and irritable bowel syndrome based on pathophysiology

(2015) Nicholas J. Talley et al.   JOURNAL OF GASTROENTEROLOGY

Proteobacteria: microbial signature of dysbiosis in gut microbiota

(2015) Na-Ri Shin et al.   TRENDS IN BIOTECHNOLOGY

Xiaoyao pill for treatment of functional dyspepsia in perimenopausal women with depression

(2014) Han-Guang Du   WORLD JOURNAL OF GASTROENTEROLOGY

The role of short-chain fatty acids in the interplay between diet, gut microbiota, and host energy metabolism

(2013) Gijs den Besten et al.   JOURNAL OF LIPID RESEARCH

UPARSE: highly accurate OTU sequences from microbial amplicon reads

(2013) Robert C Edgar   NATURE METHODS

Intestinal microbiota in functional bowel disorders: a Rome foundation report

(2012) Magnus Simrén et al.   GUT

Functional interactions between the gut microbiota and host metabolism

(2012) Valentina Tremaroli et al.   NATURE

Quality-filtering vastly improves diversity estimates from Illumina amplicon sequencing

(2012) Nicholas A Bokulich et al.   NATURE METHODS

FLASH: fast length adjustment of short reads to improve genome assemblies

(2011) T. Magoc et al.   BIOINFORMATICS

Chinese Herbal Formula Xiao Yao San for Treatment of Depression: A Systematic Review of Randomized Controlled Trials

(2011) Yuqing Zhang et al.   Evidence-based Complementary and Alternative Medicine

Global and Deep Molecular Analysis of Microbiota Signatures in Fecal Samples From Patients With Irritable Bowel Syndrome

(2011) Mirjana Rajilić–Stojanović et al.   GASTROENTEROLOGY

PyNAST: a flexible tool for aligning sequences to a template alignment

(2009) J. G. Caporaso et al.   BIOINFORMATICS

Intestinal microflora molecular markers of spleen-deficient rats and evaluation of traditional Chinese drugs

(2009) Ying Peng et al.   WORLD JOURNAL OF GASTROENTEROLOGY