Population structure and genetic diversity of coffee progenies derived from Catuaí and Híbrido de Timor revealed by genome-wide SNP marker

Molecular markers useful to discriminate Coffea arabica cultivars with high genetic similarity

(2017) Tiago Vieira Sousa et al.   EUPHYTICA

Marker-assisted selection provides arabica coffee with genes from other Coffea species targeting on multiple resistance to rust and coffee berry disease

(2017) Emilly Ruas Alkimim et al.   MOLECULAR BREEDING

Breeding Jatropha curcas by genomic selection: A pilot assessment of the accuracy of predictive models

(2017) Leonardo de Azevedo Peixoto et al.   PLoS One

A mixed model to multiple harvest-location trials applied to genomic prediction in Coffea canephora

(2017) Luís Felipe Ventorim Ferrão et al.   Tree Genetics & Genomes

Rbio: A tool for biometric and statistical analysis using the R platform

(2017) Leonardo Lopes Bhering   Crop Breeding and Applied Biotechnology

Breeding potential and genetic diversity of "Híbrido do Timor" coffee evaluated by molecular markers

(2017) Tesfahun Alemu Setotaw et al.   Crop Breeding and Applied Biotechnology

Identification of microsatellite markers in coffee associated with resistance to Meloidogyne exigua

(2016) T.B. Pereira et al.   GENETICS AND MOLECULAR RESEARCH

MEGA7: Molecular Evolutionary Genetics Analysis Version 7.0 for Bigger Datasets

(2016) Sudhir Kumar et al.   MOLECULAR BIOLOGY AND EVOLUTION

Efficiency of Plant Breeding

(2015) Salvatore Ceccarelli   CROP SCIENCE

New EST–SSR markers of Coffea arabica: transferability and application to studies of molecular characterization and genetic mapping

(2015) Luís Felipe V. Ferrão et al.   MOLECULAR BREEDING

Inheritance study and linkage mapping of resistance loci to Hemileia vastatrix in Híbrido de Timor UFV 443-03

(2015) Kátia Nogueira Pestana et al.   Tree Genetics & Genomes

A genetic linkage map of coffee (Coffea arabica L.) and QTL for yield, plant height, and bean size

(2015) Maria Del Pilar Moncada et al.   Tree Genetics & Genomes

MOSAIK: A Hash-Based Algorithm for Accurate Next-Generation Sequencing Short-Read Mapping

(2014) Wan-Ping Lee et al.   PLoS One

The coffee genome provides insight into the convergent evolution of caffeine biosynthesis

(2014) F. Denoeud et al.   SCIENCE

Six species of Psilanthus transferred to Coffea (Coffeeae, Rubiaceae)

(2014) A. P. Davis   Phytotaxa

Development and validation of SSR markers for Coffea arabica L.

(2014) R.F. Missio et al.   Crop Breeding and Applied Biotechnology

GENES - a software package for analysis in experimental statistics and quantitative genetics - doi: 10.4025/actasciagron.v35i3.21251

(2013) Cosme Damião Cruz   Acta scientiarum. Agronomy.

Coefficient of Parentage in L. Cultivars Grown in Brazil

(2013) Tesfahun Alemu Setotaw et al.   CROP SCIENCE

Identification of a major QTL for adult plant resistance to coffee leaf rust (Hemileia vastatrix) in the natural Timor hybrid (Coffea arabicaxC. canephora)

(2013) Gladys Romero et al.   PLANT BREEDING

Whole-exome targeted sequencing of the uncharacterized pine genome

(2013) Leandro G. Neves et al.   PLANT JOURNAL

Genetic variation and risks of introgression in the wildCoffea arabicagene pool in south-western Ethiopian montane rainforests

(2012) Raf Aerts et al.   Evolutionary Applications

Accuracy of Genomic Selection Methods in a Standard Data Set of Loblolly Pine (Pinus taeda L.)

(2012) M. F. R. Resende et al.   GENETICS

The variant call format and VCFtools

(2011) P. Danecek et al.   BIOINFORMATICS

Genomic Selection in Plant Breeding: A Comparison of Models

(2011) Nicolas Heslot et al.   CROP SCIENCE

Genetic characterization of an elite coffee germplasm assessed by gSSR and EST-SSR markers

(2011) R.F. Missio et al.   GENETICS AND MOLECULAR RESEARCH

Accelerating the domestication of trees using genomic selection: accuracy of prediction models across ages and environments

(2011) M. F. R. Resende et al.   NEW PHYTOLOGIST

Psilanthus mannii, the type species of Psilanthus, transferred to Coffea

(2011) Aaron P. Davis   NORDIC JOURNAL OF BOTANY

High-density genetic mapping for coffee leaf rust resistance

(2011) Valdir Diola et al.   Tree Genetics & Genomes

Evolution of plant breeding

(2011) Arnel R. Hallauer   Crop Breeding and Applied Biotechnology

Multivariate analysis of sensory characteristics of coffee grains (Coffea Arabica L.) in the region of upper Paranaíba

(2010) Sara Maria Chalfoun et al.   Acta scientiarum. Agronomy.

Quality control and quality assurance in genotypic data for genome-wide association studies

(2010) Cathy C. Laurie et al.   GENETIC EPIDEMIOLOGY

Prediction of Genetic Values of Quantitative Traits in Plant Breeding Using Pedigree and Molecular Markers

(2010) J. Crossa et al.   GENETICS

Development of microsatellite markers for identifying Brazilian Coffea arabica varieties

(2010) Elisa S.N. Vieira et al.   GENETICS AND MOLECULAR BIOLOGY

Analysis of alien introgression in coffee tree (Coffea arabica L.)

(2010) Philippe Lashermes et al.   MOLECULAR BREEDING

A High-Throughput Data Mining of Single Nucleotide Polymorphisms in Coffea Species Expressed Sequence Tags Suggests Differential Homeologous Gene Expression in the Allotetraploid Coffea arabica

(2010) R. O. Vidal et al.   PLANT PHYSIOLOGY

Solution hybrid selection with ultra-long oligonucleotides for massively parallel targeted sequencing

(2009) Andreas Gnirke et al.   NATURE BIOTECHNOLOGY

Development and Characterization of a High Density SNP Genotyping Assay for Cattle

(2009) Lakshmi K. Matukumalli et al.   PLoS One

The Genome Sequence of Taurine Cattle: A Window to Ruminant Biology and Evolution

(2009) et al.   SCIENCE

Assessment of EST-SSR markers for genetic analisys on coffee

(2009) Robson Fernando Missio et al.   BRAGANTIA

Development of new genomic microsatellite markers from robusta coffee (Coffea canephora Pierre ex A. Froehner) showing broad cross-species transferability and utility in genetic studies

(2008) Prasad Hendre et al.   BMC PLANT BIOLOGY

Diversity in coffee assessed with SSR markers: structure of the genus Coffea and perspectives for breeding

(2008) Philippe Cubry et al.   GENOME

First Coffea arabica karyogram showing that this species is a true allotetraploid

(2008) W. R. Clarindo et al.   PLANT SYSTEMATICS AND EVOLUTION